Gene annotation
Transcriptome id Sobic.002G030725.1
Synonym -
Functional annotation -
UniProt A0A1W0W227
Pfam PF03168
Panther DB PTHR31852:SF1 PTHR31852
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65690 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os04g58090.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048346 , Zm00025a017511 , Zm00025a006511
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G085901 - -
2 Sobic.002G265133 - -
3 Sobic.001G261468 - -
4 Sobic.009G109850 - -
5 Sobic.004G293900 thioesterase family protein, putative, expressed -
6 Sobic.007G175400 carrier, putative, expressed -
7 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G205700 THION18 - Plant thionin family protein precursor, expressed -
10 Sobic.008G132300 boron transporter protein, putative, expressed -
11 Sobic.003G040400 cytochrome P450, putative, expressed -
12 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
13 Sobic.004G293800 thioesterase family protein, putative, expressed -
14 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
15 Sobic.002G332300 expressed protein -
16 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.008G189800 CHCH domain containing protein, expressed -
18 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic002G030725 Sobic002G030725 Sobic005G085901 Sobic005G085901 Sobic002G030725--Sobic005G085901 Sobic002G265133 Sobic002G265133 Sobic002G030725--Sobic002G265133 Sobic001G261468 Sobic001G261468 Sobic002G030725--Sobic001G261468 Sobic009G109850 Sobic009G109850 Sobic002G030725--Sobic009G109850 Sobic004G293900 Sobic004G293900 Sobic002G030725--Sobic004G293900 Sobic007G175400 Sobic007G175400 Sobic002G030725--Sobic007G175400 Sobic003G231500 Sobic003G231500 Sobic002G030725--Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic002G030725--Sobic001G238600 Sobic003G205700 Sobic003G205700 Sobic002G030725--Sobic003G205700 Sobic005G085901--Sobic007G175400 Sobic003G040400 Sobic003G040400 Sobic005G085901--Sobic003G040400 Sobic001G332050 Sobic001G332050 Sobic005G085901--Sobic001G332050 Sobic002G265133--Sobic004G293900 Sobic009G069100 Sobic009G069100 Sobic002G265133--Sobic009G069100 Sobic010G152900 Sobic010G152900 Sobic002G265133--Sobic010G152900 Sobic002G129700 Sobic002G129700 Sobic002G265133--Sobic002G129700 Sobic002G265133--Sobic001G332050 Sobic001G336700 Sobic001G336700 Sobic001G261468--Sobic001G336700 Sobic006G124600 Sobic006G124600 Sobic001G261468--Sobic006G124600 Sobic003G220000 Sobic003G220000 Sobic001G261468--Sobic003G220000 Sobic001G362100 Sobic001G362100 Sobic001G261468--Sobic001G362100 Sobic001G261468--Sobic003G231500 Sobic010G245500 Sobic010G245500 Sobic001G261468--Sobic010G245500 Sobic003G180400 Sobic003G180400 Sobic001G261468--Sobic003G180400 Sobic010G024800 Sobic010G024800 Sobic001G261468--Sobic010G024800 Sobic001G261468--Sobic002G030725 Sobic010G108200 Sobic010G108200 Sobic009G109850--Sobic010G108200 Sobic001G147650 Sobic001G147650 Sobic009G109850--Sobic001G147650 Sobic010G159500 Sobic010G159500 Sobic009G109850--Sobic010G159500 Sobic003G071300 Sobic003G071300 Sobic009G109850--Sobic003G071300 Sobic004G293800 Sobic004G293800 Sobic009G109850--Sobic004G293800 Sobic003G071100 Sobic003G071100 Sobic009G109850--Sobic003G071100 Sobic007G073300 Sobic007G073300 Sobic009G109850--Sobic007G073300 Sobic005G135400 Sobic005G135400 Sobic009G109850--Sobic005G135400 Sobic006G125600 Sobic006G125600 Sobic009G109850--Sobic006G125600 Sobic004G293900--Sobic010G159500 Sobic004G293900--Sobic001G332050 Sobic007G175400--Sobic010G152900 Sobic007G175400--Sobic003G040400 Sobic009G116300 Sobic009G116300 Sobic007G175400--Sobic009G116300 Sobic007G175400--Sobic001G332050 Sobic003G231500--Sobic001G238600 Sobic003G236701 Sobic003G236701 Sobic003G231500--Sobic003G236701 Sobic006G066500 Sobic006G066500 Sobic003G231500--Sobic006G066500 Sobic001G422300 Sobic001G422300 Sobic003G231500--Sobic001G422300 Sobic006G226200 Sobic006G226200 Sobic003G231500--Sobic006G226200 Sobic003G231500--Sobic003G220000 Sobic006G209300 Sobic006G209300 Sobic003G231500--Sobic006G209300 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic001G238600--Sobic003G231500 Sobic001G238600--Sobic001G422300 Sobic002G332300 Sobic002G332300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic001G238600--Sobic003G220000 Sobic001G238600--Sobic006G066500 Sobic010G232000 Sobic010G232000 Sobic001G238600--Sobic010G232000 Sobic008G010400 Sobic008G010400 Sobic001G238600--Sobic008G010400 Sobic005G011100 Sobic005G011100 Sobic001G238600--Sobic005G011100 Sobic003G413400 Sobic003G413400 Sobic003G205700--Sobic003G413400 Sobic004G159200 Sobic004G159200 Sobic003G205700--Sobic004G159200 Sobic003G206200 Sobic003G206200 Sobic003G205700--Sobic003G206200 Sobic004G090700 Sobic004G090700 Sobic003G205700--Sobic004G090700 Sobic002G129600 Sobic002G129600 Sobic003G205700--Sobic002G129600 Sobic008G189800 Sobic008G189800 Sobic003G205700--Sobic008G189800 Sobic003G206300 Sobic003G206300 Sobic003G205700--Sobic003G206300 Sobic003G205700--Sobic009G116300 Sobic008G138300 Sobic008G138300 Sobic003G205700--Sobic008G138300
Octagon: transcription factors


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