Gene annotation
Transcriptome id Sobic.002G047800.1
Synonym
Functional annotation -
UniProt A0A1B6Q990
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a056186
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G044700 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.008G059800 expressed protein -
3 Sobic.010G144500 - -
4 Sobic.009G082550 - -
5 Sobic.008G121800 - -
6 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
7 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
8 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G276200 - -
12 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
14 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.003G236701 - -
16 Sobic.004G104500 PPR repeat domain containing protein, putative, expressed -
17 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
19 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
20 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein


Gene co-expression network
sample Sobic002G047800 Sobic002G047800 Sobic005G044700 Sobic005G044700 Sobic002G047800--Sobic005G044700 Sobic008G059800 Sobic008G059800 Sobic002G047800--Sobic008G059800 Sobic010G144500 Sobic010G144500 Sobic002G047800--Sobic010G144500 Sobic009G082550 Sobic009G082550 Sobic002G047800--Sobic009G082550 Sobic008G121800 Sobic008G121800 Sobic002G047800--Sobic008G121800 Sobic004G344200 Sobic004G344200 Sobic002G047800--Sobic004G344200 Sobic009G153800 Sobic009G153800 Sobic002G047800--Sobic009G153800 Sobic009G162800 Sobic009G162800 Sobic002G047800--Sobic009G162800 Sobic003G352800 Sobic003G352800 Sobic002G047800--Sobic003G352800 Sobic010G231050 Sobic010G231050 Sobic005G044700--Sobic010G231050 Sobic001G246300 Sobic001G246300 Sobic005G044700--Sobic001G246300 Sobic006G046500 Sobic006G046500 Sobic005G044700--Sobic006G046500 Sobic005G044700--Sobic002G047800 Sobic002G103200 Sobic002G103200 Sobic005G044700--Sobic002G103200 Sobic010G108200 Sobic010G108200 Sobic005G044700--Sobic010G108200 Sobic001G147650 Sobic001G147650 Sobic005G044700--Sobic001G147650 Sobic005G135400 Sobic005G135400 Sobic005G044700--Sobic005G135400 Sobic002G039400 Sobic002G039400 Sobic005G044700--Sobic002G039400 Sobic002G164600 Sobic002G164600 Sobic008G059800--Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic008G059800--Sobic003G236701 Sobic009G241600 Sobic009G241600 Sobic008G059800--Sobic009G241600 Sobic008G059800--Sobic009G153800 Sobic010G199700 Sobic010G199700 Sobic008G059800--Sobic010G199700 Sobic007G223600 Sobic007G223600 Sobic008G059800--Sobic007G223600 Sobic008G112200 Sobic008G112200 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic006G066500 Sobic006G066500 Sobic008G059800--Sobic006G066500 Sobic003G276200 Sobic003G276200 Sobic010G144500--Sobic003G276200 Sobic010G200900 Sobic010G200900 Sobic010G144500--Sobic010G200900 Sobic010G144500--Sobic009G162800 Sobic006G145600 Sobic006G145600 Sobic010G144500--Sobic006G145600 Sobic002G431700 Sobic002G431700 Sobic010G144500--Sobic002G431700 Sobic004G056300 Sobic004G056300 Sobic010G144500--Sobic004G056300 Sobic010G144500--Sobic002G047800 Sobic001G050300 Sobic001G050300 Sobic010G144500--Sobic001G050300 Sobic001G510200 Sobic001G510200 Sobic010G144500--Sobic001G510200 Sobic009G082550--Sobic003G276200 Sobic003G153400 Sobic003G153400 Sobic009G082550--Sobic003G153400 Sobic006G166800 Sobic006G166800 Sobic009G082550--Sobic006G166800 Sobic009G082550--Sobic008G059800 Sobic009G082550--Sobic002G164600 Sobic007G027200 Sobic007G027200 Sobic009G082550--Sobic007G027200 Sobic003G112200 Sobic003G112200 Sobic009G082550--Sobic003G112200 Sobic009G082550--Sobic009G162800 Sobic009G082550--Sobic003G236701 Sobic005G145950 Sobic005G145950 Sobic008G121800--Sobic005G145950 Sobic002G065800 Sobic002G065800 Sobic008G121800--Sobic002G065800 Sobic008G121800--Sobic005G044700 Sobic008G121800--Sobic001G246300 Sobic010G140200 Sobic010G140200 Sobic008G121800--Sobic010G140200 Sobic001G311866 Sobic001G311866 Sobic008G121800--Sobic001G311866 Sobic007G070400 Sobic007G070400 Sobic008G121800--Sobic007G070400 Sobic001G291600 Sobic001G291600 Sobic008G121800--Sobic001G291600 Sobic001G099400 Sobic001G099400 Sobic008G121800--Sobic001G099400 Sobic002G003200 Sobic002G003200 Sobic004G344200--Sobic002G003200 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic004G344200--Sobic008G059800 Sobic008G163000 Sobic008G163000 Sobic004G344200--Sobic008G163000 Sobic004G344200--Sobic008G112200 Sobic004G344200--Sobic002G164600 Sobic006G001000 Sobic006G001000 Sobic004G344200--Sobic006G001000 Sobic004G344200--Sobic009G241600 Sobic009G153800--Sobic008G059800 Sobic009G153800--Sobic002G003200 Sobic009G153800--Sobic004G344200 Sobic009G153800--Sobic010G199700 Sobic009G153800--Sobic003G352800 Sobic009G153800--Sobic008G112200 Sobic009G153800--Sobic002G164600 Sobic009G153800--Sobic009G241600 Sobic009G153800--Sobic003G236701 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic010G196400 Sobic010G196400 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic009G162800--Sobic002G394700 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic003G352800--Sobic008G059800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400
Octagon: transcription factors


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