Gene annotation
Transcriptome id Sobic.010G144500.2
Synonym
Functional annotation -
UniProt A0A194YKB1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G276200 - -
2 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
5 Sobic.002G431700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
6 Sobic.004G056300 transglycosylase SLT domain containing protein, expressed -
7 Sobic.002G047800 - -
8 Sobic.001G050300 LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
9 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.002G260100 - -
12 Sobic.005G006701 - -
13 Sobic.010G245500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.006G059400 - -
16 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.001G359100 cytochrome P450, putative, expressed -
18 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
19 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
20 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -


Gene co-expression network
sample Sobic010G144500 Sobic010G144500 Sobic003G276200 Sobic003G276200 Sobic010G144500--Sobic003G276200 Sobic010G200900 Sobic010G200900 Sobic010G144500--Sobic010G200900 Sobic009G162800 Sobic009G162800 Sobic010G144500--Sobic009G162800 Sobic006G145600 Sobic006G145600 Sobic010G144500--Sobic006G145600 Sobic002G431700 Sobic002G431700 Sobic010G144500--Sobic002G431700 Sobic004G056300 Sobic004G056300 Sobic010G144500--Sobic004G056300 Sobic002G047800 Sobic002G047800 Sobic010G144500--Sobic002G047800 Sobic001G050300 Sobic001G050300 Sobic010G144500--Sobic001G050300 Sobic001G510200 Sobic001G510200 Sobic010G144500--Sobic001G510200 Sobic003G276200--Sobic009G162800 Sobic006G166800 Sobic006G166800 Sobic003G276200--Sobic006G166800 Sobic003G153400 Sobic003G153400 Sobic003G276200--Sobic003G153400 Sobic009G082550 Sobic009G082550 Sobic003G276200--Sobic009G082550 Sobic010G196400 Sobic010G196400 Sobic003G276200--Sobic010G196400 Sobic003G276200--Sobic001G510200 Sobic009G151000 Sobic009G151000 Sobic003G276200--Sobic009G151000 Sobic007G027200 Sobic007G027200 Sobic003G276200--Sobic007G027200 Sobic003G352800 Sobic003G352800 Sobic003G276200--Sobic003G352800 Sobic003G062900 Sobic003G062900 Sobic010G200900--Sobic003G062900 Sobic003G070200 Sobic003G070200 Sobic010G200900--Sobic003G070200 Sobic001G153800 Sobic001G153800 Sobic010G200900--Sobic001G153800 Sobic001G359100 Sobic001G359100 Sobic010G200900--Sobic001G359100 Sobic006G059400 Sobic006G059400 Sobic010G200900--Sobic006G059400 Sobic002G334400 Sobic002G334400 Sobic010G200900--Sobic002G334400 Sobic002G305400 Sobic002G305400 Sobic010G200900--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic010G200900--Sobic009G087900 Sobic002G260100 Sobic002G260100 Sobic010G200900--Sobic002G260100 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic009G162800--Sobic002G394700 Sobic009G162800--Sobic003G276200 Sobic009G241600 Sobic009G241600 Sobic009G162800--Sobic009G241600 Sobic005G006701 Sobic005G006701 Sobic006G145600--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic006G145600--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic006G145600--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic006G145600--Sobic007G010350 Sobic001G092700 Sobic001G092700 Sobic006G145600--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic006G145600--Sobic007G219300 Sobic001G355300 Sobic001G355300 Sobic006G145600--Sobic001G355300 Sobic005G125400 Sobic005G125400 Sobic006G145600--Sobic005G125400 Sobic003G164300 Sobic003G164300 Sobic006G145600--Sobic003G164300 Sobic002G431700--Sobic006G145600 Sobic002G431700--Sobic001G050300 Sobic002G431700--Sobic010G200900 Sobic003G326700 Sobic003G326700 Sobic002G431700--Sobic003G326700 Sobic002G431700--Sobic004G089400 Sobic001G266200 Sobic001G266200 Sobic002G431700--Sobic001G266200 Sobic002G431700--Sobic005G006701 Sobic002G431700--Sobic005G125400 Sobic002G431700--Sobic001G510200 Sobic004G056300--Sobic006G059400 Sobic004G056300--Sobic001G359100 Sobic004G056300--Sobic003G070200 Sobic004G056300--Sobic002G334400 Sobic004G056300--Sobic001G153800 Sobic004G056300--Sobic003G062900 Sobic004G056300--Sobic002G305400 Sobic004G056300--Sobic002G260100 Sobic004G056300--Sobic009G087900 Sobic005G044700 Sobic005G044700 Sobic002G047800--Sobic005G044700 Sobic008G059800 Sobic008G059800 Sobic002G047800--Sobic008G059800 Sobic002G047800--Sobic010G144500 Sobic002G047800--Sobic009G082550 Sobic008G121800 Sobic008G121800 Sobic002G047800--Sobic008G121800 Sobic004G344200 Sobic004G344200 Sobic002G047800--Sobic004G344200 Sobic009G153800 Sobic009G153800 Sobic002G047800--Sobic009G153800 Sobic002G047800--Sobic009G162800 Sobic002G047800--Sobic003G352800 Sobic001G050300--Sobic010G200900 Sobic001G050300--Sobic001G510200 Sobic001G050300--Sobic002G394700 Sobic001G050300--Sobic002G431700 Sobic005G088500 Sobic005G088500 Sobic001G050300--Sobic005G088500 Sobic001G050300--Sobic001G266200 Sobic001G050300--Sobic006G145600 Sobic001G050300--Sobic009G162800 Sobic001G050300--Sobic006G166800 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200
Octagon: transcription factors


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