Gene annotation
Transcriptome id Sobic.002G071700.1
Synonym Sb02g006030, RPS3, RPM1
Functional annotation resistance protein, putative, expressed
UniProt A0A1B6Q9N7
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF529
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g42670.1 : resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08096 , PNT72119
Barley HORVU3Hr1G113780.11 , HORVU3Hr1G113780.10 , HORVU3Hr1G113780.13 , HORVU3Hr1G113780.12 , HORVU3Hr1G113790.3 , HORVU3Hr1G113790.19 , HORVU3Hr1G113790.4 , HORVU3Hr1G113790.5 , HORVU3Hr1G113790.8 , HORVU5Hr1G019310.20 , HORVU5Hr1G019310.25 , HORVU5Hr1G019310.26 , HORVU3Hr1G113810.1 , HORVU3Hr1G113790.6 , HORVU3Hr1G113790.7 , HORVU3Hr1G113790.14 , HORVU3Hr1G113790.15 , HORVU5Hr1G019310.15 , HORVU5Hr1G019310.14 , HORVU5Hr1G019310.11 , HORVU5Hr1G019310.19 , HORVU5Hr1G019310.18 , HORVU3Hr1G113780.9 , HORVU3Hr1G113780.8 , HORVU3Hr1G113780.5 , HORVU3Hr1G113780.4 , HORVU3Hr1G113780.7 , HORVU3Hr1G113780.6 , HORVU3Hr1G113780.1 , HORVU3Hr1G113780.3 , HORVU3Hr1G113780.2 , HORVU5Hr1G019310.6 , HORVU5Hr1G019310.3 , HORVU5Hr1G019310.2 , HORVU5Hr1G019310.5 , HORVU5Hr1G019310.4 , HORVU5Hr1G019310.7 , HORVU5Hr1G019310.9 , HORVU3Hr1G113790.1 , HORVU3Hr1G113790.18 , HORVU3Hr1G113790.16 , HORVU3Hr1G113790.17 , HORVU3Hr1G113790.11 , HORVU3Hr1G113790.12 , HORVU3Hr1G113790.13 , HORVU7Hr1G021680.2 , HORVU7Hr1G021680.1 , HORVU3Hr1G113790.21 , HORVU3Hr1G113790.20 , HORVU3Hr1G113790.22 , HORVU3Hr1G113790.25 , HORVU3Hr1G113790.24 , HORVU3Hr1G113790.27 , HORVU3Hr1G113790.26 , HORVU3Hr1G113790.28
Wheat TraesCS1D02G019700 , TraesCS7A02G268000 , TraesCS3D02G526600 , TraesCS7A02G101700 , TraesCS4D02G360500 , TraesCS6B02G458900 , TraesCS7A02G101700 , TraesCS3B02G587900 , TraesCS4A02G400300 , TraesCS3B02G588900 , TraesCS5A02G073500 , TraesCS3B02G589100 , TraesCS3D02G528300 , TraesCS1B02G027500 , TraesCS1B02G027500 , TraesCS6B02G457800 , TraesCS6B02G457800 , TraesCS3B02G589300 , TraesCS5D02G040200 , TraesCS1A02G021700 , TraesCS6D02G405800 , TraesCS6D02G405800 , TraesCS3B02G588500 , TraesCS6B02G468400 , TraesCS5B02G079800 , TraesCS5B02G079800 , TraesCS2D02G026200 , TraesCS5D02G086800 , TraesCS1B02G026300 , TraesCS6B02G459500 , TraesCS6B02G459200 , TraesCS6D02G394500 , TraesCS3B02G589500 , TraesCSU02G059400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G044000 - -
2 Sobic.008G148900 B3 DNA binding domain containing protein, expressed -
3 Sobic.010G048933 - -
4 Sobic.010G141700 FAR1 family protein, expressed -
5 Sobic.003G408700 expressed protein -
6 Sobic.004G254200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
7 Sobic.001G507933 - -
8 Sobic.008G177700 strictosidine synthase, putative, expressed -
9 Sobic.004G294000 thioesterase family protein, putative, expressed -
10 Sobic.003G242500 expressed protein -
11 Sobic.002G039301 - -
12 Sobic.002G393266 - -
13 Sobic.001G110150 - -
14 Sobic.005G041800 expressed protein -
15 Sobic.002G032033 - -
16 Sobic.002G430601 - -
17 Sobic.003G154600 expressed protein -
18 Sobic.005G094332 - -
19 Sobic.004G098650 - -
20 Sobic.003G373200 strictosidine synthase, putative, expressed -


Gene co-expression network
sample Sobic002G071700 Sobic002G071700 Sobic007G044000 Sobic007G044000 Sobic002G071700--Sobic007G044000 Sobic008G148900 Sobic008G148900 Sobic002G071700--Sobic008G148900 Sobic010G048933 Sobic010G048933 Sobic002G071700--Sobic010G048933 Sobic010G141700 Sobic010G141700 Sobic002G071700--Sobic010G141700 Sobic003G408700 Sobic003G408700 Sobic002G071700--Sobic003G408700 Sobic004G254200 Sobic004G254200 Sobic002G071700--Sobic004G254200 Sobic001G507933 Sobic001G507933 Sobic002G071700--Sobic001G507933 Sobic008G177700 Sobic008G177700 Sobic002G071700--Sobic008G177700 Sobic004G294000 Sobic004G294000 Sobic002G071700--Sobic004G294000 Sobic007G044000--Sobic010G141700 Sobic007G044000--Sobic003G408700 Sobic007G044000--Sobic004G254200 Sobic007G044000--Sobic001G507933 Sobic007G044000--Sobic002G071700 Sobic007G044000--Sobic008G177700 Sobic007G044000--Sobic010G048933 Sobic003G242500 Sobic003G242500 Sobic007G044000--Sobic003G242500 Sobic002G039301 Sobic002G039301 Sobic007G044000--Sobic002G039301 Sobic008G148900--Sobic002G071700 Sobic008G148900--Sobic007G044000 Sobic008G148900--Sobic010G048933 Sobic008G148900--Sobic004G294000 Sobic008G148900--Sobic010G141700 Sobic008G148900--Sobic003G408700 Sobic008G148900--Sobic004G254200 Sobic002G367500 Sobic002G367500 Sobic008G148900--Sobic002G367500 Sobic001G369600 Sobic001G369600 Sobic008G148900--Sobic001G369600 Sobic010G048933--Sobic004G294000 Sobic010G048933--Sobic007G044000 Sobic010G048933--Sobic002G071700 Sobic010G048933--Sobic010G141700 Sobic010G048933--Sobic003G408700 Sobic010G048933--Sobic004G254200 Sobic005G208801 Sobic005G208801 Sobic010G048933--Sobic005G208801 Sobic010G048933--Sobic008G148900 Sobic010G048933--Sobic001G507933 Sobic010G141700--Sobic003G408700 Sobic010G141700--Sobic004G254200 Sobic010G141700--Sobic001G507933 Sobic010G141700--Sobic008G177700 Sobic010G141700--Sobic003G242500 Sobic002G430601 Sobic002G430601 Sobic010G141700--Sobic002G430601 Sobic001G018700 Sobic001G018700 Sobic010G141700--Sobic001G018700 Sobic003G408700--Sobic004G254200 Sobic003G408700--Sobic010G141700 Sobic003G408700--Sobic001G507933 Sobic003G408700--Sobic008G177700 Sobic003G408700--Sobic003G242500 Sobic003G408700--Sobic002G430601 Sobic003G408700--Sobic001G018700 Sobic004G254200--Sobic003G408700 Sobic004G254200--Sobic010G141700 Sobic004G254200--Sobic001G507933 Sobic004G254200--Sobic008G177700 Sobic004G254200--Sobic003G242500 Sobic004G254200--Sobic002G430601 Sobic004G254200--Sobic001G018700 Sobic001G507933--Sobic004G254200 Sobic001G507933--Sobic003G408700 Sobic001G507933--Sobic010G141700 Sobic001G507933--Sobic008G177700 Sobic001G507933--Sobic003G242500 Sobic001G507933--Sobic002G430601 Sobic001G507933--Sobic001G018700 Sobic008G177700--Sobic003G242500 Sobic008G177700--Sobic001G507933 Sobic008G177700--Sobic004G254200 Sobic008G177700--Sobic003G408700 Sobic008G177700--Sobic010G141700 Sobic001G030800 Sobic001G030800 Sobic008G177700--Sobic001G030800 Sobic008G177700--Sobic001G018700 Sobic004G294000--Sobic010G048933 Sobic004G294000--Sobic005G208801 Sobic001G303750 Sobic001G303750 Sobic004G294000--Sobic001G303750 Sobic001G116300 Sobic001G116300 Sobic004G294000--Sobic001G116300 Sobic001G209500 Sobic001G209500 Sobic004G294000--Sobic001G209500 Sobic005G208600 Sobic005G208600 Sobic004G294000--Sobic005G208600 Sobic004G289200 Sobic004G289200 Sobic004G294000--Sobic004G289200 Sobic004G294000--Sobic007G044000 Sobic004G294000--Sobic002G071700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.