Gene annotation
Transcriptome id Sobic.002G144666.1
Synonym -
Functional annotation -
UniProt A0A1W0W416
Pfam PF04434
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT2G27110 : FAR1-related sequence 3
RAP-DB (Rice) LOC_Os02g40950.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
2 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
3 Sobic.007G076100 transferase family protein, putative, expressed -
4 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
6 Sobic.007G094200 expressed protein -
7 Sobic.006G079500 AMP-binding domain containing protein, expressed -
8 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
9 Sobic.004G227900 expansin precursor, putative, expressed -
10 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.005G226600 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
13 Sobic.010G053300 expressed protein -
14 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
15 Sobic.007G048500 CXXC1 - Cysteine-rich protein with CXXC and CXXXC motifs precursor, putative, expressed -
16 Sobic.010G048200 expressed protein -
17 Sobic.005G226500 thaumatin family domain containing protein, expressed -
18 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
19 Sobic.001G110100 expressed protein -
20 Sobic.005G089700 expressed protein -


Gene co-expression network
sample Sobic002G144666 Sobic002G144666 Sobic001G341700 Sobic001G341700 Sobic002G144666--Sobic001G341700 Sobic004G318800 Sobic004G318800 Sobic002G144666--Sobic004G318800 Sobic007G076100 Sobic007G076100 Sobic002G144666--Sobic007G076100 Sobic003G178500 Sobic003G178500 Sobic002G144666--Sobic003G178500 Sobic002G416400 Sobic002G416400 Sobic002G144666--Sobic002G416400 Sobic007G094200 Sobic007G094200 Sobic002G144666--Sobic007G094200 Sobic006G079500 Sobic006G079500 Sobic002G144666--Sobic006G079500 Sobic005G218000 Sobic005G218000 Sobic002G144666--Sobic005G218000 Sobic004G227900 Sobic004G227900 Sobic002G144666--Sobic004G227900 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic006G092300 Sobic006G092300 Sobic001G341700--Sobic006G092300 Sobic006G089700 Sobic006G089700 Sobic001G341700--Sobic006G089700 Sobic002G312200 Sobic002G312200 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic004G318800--Sobic007G076100 Sobic004G318800--Sobic006G079500 Sobic004G318800--Sobic001G341700 Sobic004G318800--Sobic006G092300 Sobic004G318800--Sobic005G218000 Sobic004G318800--Sobic006G089700 Sobic007G206000 Sobic007G206000 Sobic004G318800--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic004G318800--Sobic007G048500 Sobic005G226500 Sobic005G226500 Sobic004G318800--Sobic005G226500 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic007G076100--Sobic002G312200 Sobic007G076100--Sobic006G089700 Sobic007G076100--Sobic002G416400 Sobic003G178500--Sobic007G076100 Sobic003G178500--Sobic002G416400 Sobic003G178500--Sobic005G218000 Sobic010G166300 Sobic010G166300 Sobic003G178500--Sobic010G166300 Sobic003G178500--Sobic004G318800 Sobic003G178500--Sobic001G341700 Sobic009G023900 Sobic009G023900 Sobic003G178500--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic003G178500--Sobic003G027100 Sobic004G211700 Sobic004G211700 Sobic003G178500--Sobic004G211700 Sobic002G416400--Sobic003G178500 Sobic002G416400--Sobic007G076100 Sobic002G416400--Sobic004G318800 Sobic002G416400--Sobic005G218000 Sobic002G416400--Sobic007G094200 Sobic002G416400--Sobic001G341700 Sobic004G342000 Sobic004G342000 Sobic002G416400--Sobic004G342000 Sobic002G416400--Sobic006G079500 Sobic002G416400--Sobic006G092300 Sobic002G032500 Sobic002G032500 Sobic007G094200--Sobic002G032500 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic007G094200--Sobic003G178500 Sobic007G094200--Sobic004G342000 Sobic010G027700 Sobic010G027700 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic007G094200--Sobic004G227900 Sobic006G219100 Sobic006G219100 Sobic007G094200--Sobic006G219100 Sobic006G079500--Sobic005G226500 Sobic006G079500--Sobic007G048500 Sobic003G016000 Sobic003G016000 Sobic006G079500--Sobic003G016000 Sobic006G079500--Sobic007G206000 Sobic003G088200 Sobic003G088200 Sobic006G079500--Sobic003G088200 Sobic007G098600 Sobic007G098600 Sobic006G079500--Sobic007G098600 Sobic006G006900 Sobic006G006900 Sobic006G079500--Sobic006G006900 Sobic002G427550 Sobic002G427550 Sobic006G079500--Sobic002G427550 Sobic001G133200 Sobic001G133200 Sobic006G079500--Sobic001G133200 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic005G218000--Sobic006G079500 Sobic001G491400 Sobic001G491400 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic008G004200 Sobic008G004200 Sobic004G227900--Sobic008G004200 Sobic001G334501 Sobic001G334501 Sobic004G227900--Sobic001G334501 Sobic010G053300 Sobic010G053300 Sobic004G227900--Sobic010G053300 Sobic005G089700 Sobic005G089700 Sobic004G227900--Sobic005G089700 Sobic007G000600 Sobic007G000600 Sobic004G227900--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic004G227900--Sobic001G366000 Sobic005G200700 Sobic005G200700 Sobic004G227900--Sobic005G200700 Sobic004G227900--Sobic003G016000 Sobic008G032400 Sobic008G032400 Sobic004G227900--Sobic008G032400
Octagon: transcription factors


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