Gene annotation
Transcriptome id Sobic.002G147466.1
Synonym -
Functional annotation -
UniProt A0A1W0W405
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G124400 - -
2 Sobic.009G014900 expressed protein -
3 Sobic.004G322901 - -
4 Sobic.003G211600 - -
5 Sobic.002G174500 OsFBX252 - F-box domain containing protein, expressed -
6 Sobic.005G174200 - -
7 Sobic.007G032500 WD domain, G-beta repeat domain containing protein, expressed K11462: polycomb protein EED
8 Sobic.001G374600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@desiccation-related protein PCC13-62 precursor, putative, expressed -
9 Sobic.009G062300 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
10 Sobic.005G226800 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
11 Sobic.001G495700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
12 Sobic.001G371600 - -
13 Sobic.005G173900 - -
14 Sobic.007G066200 - -
15 Sobic.010G133150 - -
16 Sobic.002G267700 bZIP family transcription factor, putative, expressed -
17 Sobic.007G199500 MBTB30 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.002G015500 OsFBD13 - F-box and FBD domain containing protein, expressed -
19 Sobic.005G033600 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -


Gene co-expression network
sample Sobic002G147466 Sobic002G147466 Sobic005G124400 Sobic005G124400 Sobic002G147466--Sobic005G124400 Sobic009G014900 Sobic009G014900 Sobic002G147466--Sobic009G014900 Sobic004G322901 Sobic004G322901 Sobic002G147466--Sobic004G322901 Sobic003G211600 Sobic003G211600 Sobic002G147466--Sobic003G211600 Sobic002G174500 Sobic002G174500 Sobic002G147466--Sobic002G174500 Sobic005G174200 Sobic005G174200 Sobic002G147466--Sobic005G174200 Sobic007G032500 Sobic007G032500 Sobic002G147466--Sobic007G032500 Sobic001G374600 Sobic001G374600 Sobic002G147466--Sobic001G374600 Sobic009G062300 Sobic009G062300 Sobic002G147466--Sobic009G062300 Sobic005G124400--Sobic009G062300 Sobic005G226800 Sobic005G226800 Sobic005G124400--Sobic005G226800 Sobic003G103100 Sobic003G103100 Sobic005G124400--Sobic003G103100 Sobic005G042400 Sobic005G042400 Sobic005G124400--Sobic005G042400 Sobic001G269650 Sobic001G269650 Sobic005G124400--Sobic001G269650 Sobic007G066200 Sobic007G066200 Sobic005G124400--Sobic007G066200 Sobic005G124400--Sobic003G211600 Sobic004G029700 Sobic004G029700 Sobic005G124400--Sobic004G029700 Sobic010G133150 Sobic010G133150 Sobic005G124400--Sobic010G133150 Sobic003G092600 Sobic003G092600 Sobic009G014900--Sobic003G092600 Sobic009G014900--Sobic004G322901 Sobic009G014900--Sobic002G147466 Sobic003G325800 Sobic003G325800 Sobic009G014900--Sobic003G325800 Sobic006G015800 Sobic006G015800 Sobic009G014900--Sobic006G015800 Sobic003G414000 Sobic003G414000 Sobic009G014900--Sobic003G414000 Sobic005G083280 Sobic005G083280 Sobic009G014900--Sobic005G083280 Sobic002G267700 Sobic002G267700 Sobic009G014900--Sobic002G267700 Sobic003G091500 Sobic003G091500 Sobic009G014900--Sobic003G091500 Sobic004G322901--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic004G322901--Sobic001G261529 Sobic004G322901--Sobic003G092600 Sobic004G322901--Sobic009G014900 Sobic004G322901--Sobic006G015800 Sobic007G126000 Sobic007G126000 Sobic004G322901--Sobic007G126000 Sobic004G322901--Sobic002G147466 Sobic006G018751 Sobic006G018751 Sobic004G322901--Sobic006G018751 Sobic002G015800 Sobic002G015800 Sobic004G322901--Sobic002G015800 Sobic003G211600--Sobic005G226800 Sobic003G211600--Sobic007G066200 Sobic003G211600--Sobic001G374600 Sobic003G211600--Sobic005G174200 Sobic003G211600--Sobic009G062300 Sobic003G211600--Sobic007G032500 Sobic005G173900 Sobic005G173900 Sobic003G211600--Sobic005G173900 Sobic001G495700 Sobic001G495700 Sobic003G211600--Sobic001G495700 Sobic005G033600 Sobic005G033600 Sobic003G211600--Sobic005G033600 Sobic002G174500--Sobic002G147466 Sobic002G174500--Sobic004G322901 Sobic010G207900 Sobic010G207900 Sobic002G174500--Sobic010G207900 Sobic002G174500--Sobic007G126000 Sobic002G174500--Sobic005G083280 Sobic002G174500--Sobic001G261529 Sobic002G174500--Sobic006G018751 Sobic002G174500--Sobic009G014900 Sobic007G086701 Sobic007G086701 Sobic002G174500--Sobic007G086701 Sobic005G174200--Sobic007G032500 Sobic005G174200--Sobic001G374600 Sobic002G108300 Sobic002G108300 Sobic005G174200--Sobic002G108300 Sobic005G174200--Sobic003G211600 Sobic005G174200--Sobic001G495700 Sobic009G058300 Sobic009G058300 Sobic005G174200--Sobic009G058300 Sobic005G174200--Sobic005G033600 Sobic008G184100 Sobic008G184100 Sobic005G174200--Sobic008G184100 Sobic005G174200--Sobic003G091500 Sobic007G032500--Sobic005G174200 Sobic007G032500--Sobic009G058300 Sobic007G032500--Sobic002G108300 Sobic007G032500--Sobic001G495700 Sobic002G015500 Sobic002G015500 Sobic007G032500--Sobic002G015500 Sobic008G088900 Sobic008G088900 Sobic007G032500--Sobic008G088900 Sobic002G015400 Sobic002G015400 Sobic007G032500--Sobic002G015400 Sobic007G032500--Sobic010G133150 Sobic007G032500--Sobic001G374600 Sobic001G374600--Sobic005G174200 Sobic001G374600--Sobic003G211600 Sobic001G374600--Sobic007G032500 Sobic001G374600--Sobic005G173900 Sobic001G374600--Sobic005G033600 Sobic006G070830 Sobic006G070830 Sobic001G374600--Sobic006G070830 Sobic001G374600--Sobic001G495700 Sobic001G374600--Sobic003G091500 Sobic001G374600--Sobic008G184100 Sobic009G062300--Sobic005G226800 Sobic009G062300--Sobic003G211600 Sobic009G062300--Sobic005G124400 Sobic009G062300--Sobic007G066200 Sobic009G062300--Sobic001G269650 Sobic009G062300--Sobic005G042400 Sobic009G062300--Sobic003G103100 Sobic009G062300--Sobic001G495700 Sobic009G062300--Sobic010G133150
Octagon: transcription factors


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