Gene annotation
Transcriptome id Sobic.002G205100.1
Synonym Sb02g024990, HCT
Functional annotation transferase family protein, putative, expressed
UniProt C5XCX0
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF23
NCBI CDD -
KEGG Orthology K13065; E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os06g08640.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047050
Brachypodium -
Barley HORVU5Hr1G064280.1
Wheat TraesCS5D02G230700 , TraesCS5A02G222900 , TraesCS5B02G222000
Populus -


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cDNA sequences
Sobic.002G205100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G405400 chloroplast unusual positioning protein, putative, expressed -
2 Sobic.005G201100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
3 Sobic.009G047033 - -
4 Sobic.002G076450 - -
5 Sobic.007G182400 - -
6 Sobic.004G343733 - -
7 Sobic.003G091900 - -
8 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
9 Sobic.010G051600 - -
10 Sobic.001G062000 - -
11 Sobic.006G139900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.006G075200 Aluminium activated malate transporter("PubMedID : 26759170,PubMedID : 24597475")@aluminum-activated malate transporter, putative, expressed -
13 Sobic.001G453150 - -
14 Sobic.010G210400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
15 Sobic.002G227400 Rf1, mitochondrial precursor, putative, expressed -
16 Sobic.010G054400 leucine-rich repeat family protein, putative, expressed -
17 Sobic.001G529301 - -
18 Sobic.009G079700 C2 domain containing protein, putative, expressed -
19 Sobic.010G051900 expressed protein -
20 Sobic.008G064200 - -


Gene co-expression network
sample Sobic002G205100 Sobic002G205100 Sobic001G405400 Sobic001G405400 Sobic002G205100--Sobic001G405400 Sobic005G201100 Sobic005G201100 Sobic002G205100--Sobic005G201100 Sobic009G047033 Sobic009G047033 Sobic002G205100--Sobic009G047033 Sobic002G076450 Sobic002G076450 Sobic002G205100--Sobic002G076450 Sobic007G182400 Sobic007G182400 Sobic002G205100--Sobic007G182400 Sobic004G343733 Sobic004G343733 Sobic002G205100--Sobic004G343733 Sobic003G091900 Sobic003G091900 Sobic002G205100--Sobic003G091900 Sobic010G213100 Sobic010G213100 Sobic002G205100--Sobic010G213100 Sobic010G051600 Sobic010G051600 Sobic002G205100--Sobic010G051600 Sobic001G405400--Sobic002G205100 Sobic001G405400--Sobic005G201100 Sobic006G139900 Sobic006G139900 Sobic001G405400--Sobic006G139900 Sobic010G000401 Sobic010G000401 Sobic001G405400--Sobic010G000401 Sobic006G220100 Sobic006G220100 Sobic001G405400--Sobic006G220100 Sobic004G045000 Sobic004G045000 Sobic001G405400--Sobic004G045000 Sobic010G210400 Sobic010G210400 Sobic001G405400--Sobic010G210400 Sobic001G005100 Sobic001G005100 Sobic001G405400--Sobic001G005100 Sobic003G391800 Sobic003G391800 Sobic001G405400--Sobic003G391800 Sobic005G201100--Sobic002G076450 Sobic010G051900 Sobic010G051900 Sobic005G201100--Sobic010G051900 Sobic005G201100--Sobic009G047033 Sobic008G119100 Sobic008G119100 Sobic005G201100--Sobic008G119100 Sobic005G201100--Sobic010G000401 Sobic006G049000 Sobic006G049000 Sobic005G201100--Sobic006G049000 Sobic002G215600 Sobic002G215600 Sobic005G201100--Sobic002G215600 Sobic004G007200 Sobic004G007200 Sobic005G201100--Sobic004G007200 Sobic003G059500 Sobic003G059500 Sobic005G201100--Sobic003G059500 Sobic009G047033--Sobic010G051600 Sobic009G047033--Sobic010G051900 Sobic009G047033--Sobic003G091900 Sobic007G185000 Sobic007G185000 Sobic009G047033--Sobic007G185000 Sobic009G047033--Sobic002G076450 Sobic009G047033--Sobic004G343733 Sobic003G308900 Sobic003G308900 Sobic009G047033--Sobic003G308900 Sobic009G047033--Sobic010G213100 Sobic003G092150 Sobic003G092150 Sobic009G047033--Sobic003G092150 Sobic002G076450--Sobic008G119100 Sobic002G076450--Sobic010G051900 Sobic002G076450--Sobic009G047033 Sobic002G076450--Sobic005G201100 Sobic001G524900 Sobic001G524900 Sobic002G076450--Sobic001G524900 Sobic005G040950 Sobic005G040950 Sobic002G076450--Sobic005G040950 Sobic006G128450 Sobic006G128450 Sobic002G076450--Sobic006G128450 Sobic002G076450--Sobic003G092150 Sobic003G289300 Sobic003G289300 Sobic002G076450--Sobic003G289300 Sobic001G062000 Sobic001G062000 Sobic007G182400--Sobic001G062000 Sobic010G054400 Sobic010G054400 Sobic007G182400--Sobic010G054400 Sobic007G182400--Sobic003G091900 Sobic007G182400--Sobic010G213100 Sobic007G182400--Sobic004G343733 Sobic007G182400--Sobic009G047033 Sobic010G160850 Sobic010G160850 Sobic007G182400--Sobic010G160850 Sobic002G377400 Sobic002G377400 Sobic007G182400--Sobic002G377400 Sobic001G529301 Sobic001G529301 Sobic007G182400--Sobic001G529301 Sobic004G343733--Sobic010G054400 Sobic002G180200 Sobic002G180200 Sobic004G343733--Sobic002G180200 Sobic004G343733--Sobic009G047033 Sobic001G070900 Sobic001G070900 Sobic004G343733--Sobic001G070900 Sobic004G343733--Sobic007G182400 Sobic004G343733--Sobic010G213100 Sobic004G343733--Sobic001G062000 Sobic009G079700 Sobic009G079700 Sobic004G343733--Sobic009G079700 Sobic004G343733--Sobic003G091900 Sobic003G091900--Sobic010G213100 Sobic003G091900--Sobic007G182400 Sobic003G091900--Sobic009G047033 Sobic003G091900--Sobic001G062000 Sobic003G056900 Sobic003G056900 Sobic003G091900--Sobic003G056900 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000 Sobic010G213100--Sobic003G091900 Sobic010G213100--Sobic010G054400 Sobic010G213100--Sobic001G062000 Sobic010G213100--Sobic007G182400 Sobic010G213100--Sobic003G308900 Sobic010G213100--Sobic003G336600 Sobic010G213100--Sobic009G047033 Sobic010G213100--Sobic002G377400 Sobic010G213100--Sobic004G343733 Sobic010G051600--Sobic009G047033 Sobic001G437600 Sobic001G437600 Sobic010G051600--Sobic001G437600 Sobic010G051600--Sobic010G051900 Sobic002G076200 Sobic002G076200 Sobic010G051600--Sobic002G076200 Sobic010G051600--Sobic005G040950 Sobic005G106900 Sobic005G106900 Sobic010G051600--Sobic005G106900 Sobic010G051600--Sobic007G185000 Sobic010G010100 Sobic010G010100 Sobic010G051600--Sobic010G010100 Sobic005G059300 Sobic005G059300 Sobic010G051600--Sobic005G059300
Octagon: transcription factors


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