Gene annotation
Transcriptome id Sobic.002G219000.1
Synonym Sb02g026060
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
plant viral response family protein, putative, expressed
UniProt C5XDT0
Pfam PF04819
Panther DB PTHR16007 PTHR16007:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55230 : Family of unknown function (DUF716)
RAP-DB (Rice) LOC_Os09g27260.1 : plant viral response family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047192
Brachypodium PNT64693
Barley HORVU5Hr1G066720.2 , HORVU5Hr1G066720.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G147600 - -
2 Sobic.002G219100 - -
3 Sobic.004G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.001G279800 lecithin cholesterol acyltransferase, putative, expressed -
5 Sobic.009G180900 disease resistance RPP13-like protein 1, putative, expressed -
6 Sobic.005G150700 resistance protein, putative, expressed -
7 Sobic.002G099932 - -
8 Sobic.002G160300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
9 Sobic.009G037500 expressed protein -
10 Sobic.003G012750 - -
11 Sobic.004G347833 - -
12 Sobic.001G084133 - -
13 Sobic.004G067800 zinc-binding protein, putative, expressed -
14 Sobic.003G068150 - -
15 Sobic.010G025600 OsWAK112d - OsWAK receptor-like protein kinase, expressed -
16 Sobic.010G083100 CXE carboxylesterase, putative, expressed -
17 Sobic.006G165200 amino acid permease family protein, putative, expressed -
18 Sobic.003G278800 lipase, putative, expressed -
19 Sobic.004G055400 - -
20 Sobic.007G187500 - -


Gene co-expression network
sample Sobic002G219000 Sobic002G219000 Sobic008G147600 Sobic008G147600 Sobic002G219000--Sobic008G147600 Sobic002G219100 Sobic002G219100 Sobic002G219000--Sobic002G219100 Sobic004G074400 Sobic004G074400 Sobic002G219000--Sobic004G074400 Sobic001G279800 Sobic001G279800 Sobic002G219000--Sobic001G279800 Sobic009G180900 Sobic009G180900 Sobic002G219000--Sobic009G180900 Sobic005G150700 Sobic005G150700 Sobic002G219000--Sobic005G150700 Sobic002G099932 Sobic002G099932 Sobic002G219000--Sobic002G099932 Sobic002G160300 Sobic002G160300 Sobic002G219000--Sobic002G160300 Sobic009G037500 Sobic009G037500 Sobic002G219000--Sobic009G037500 Sobic008G147600--Sobic002G219100 Sobic008G147600--Sobic004G074400 Sobic008G147600--Sobic009G180900 Sobic008G147600--Sobic005G150700 Sobic006G165200 Sobic006G165200 Sobic008G147600--Sobic006G165200 Sobic008G147600--Sobic009G037500 Sobic010G025600 Sobic010G025600 Sobic008G147600--Sobic010G025600 Sobic009G020600 Sobic009G020600 Sobic008G147600--Sobic009G020600 Sobic008G147600--Sobic002G099932 Sobic002G219100--Sobic005G150700 Sobic002G219100--Sobic001G279800 Sobic002G219100--Sobic009G037500 Sobic002G219100--Sobic010G025600 Sobic002G219100--Sobic008G147600 Sobic003G210500 Sobic003G210500 Sobic002G219100--Sobic003G210500 Sobic003G012750 Sobic003G012750 Sobic002G219100--Sobic003G012750 Sobic001G144100 Sobic001G144100 Sobic002G219100--Sobic001G144100 Sobic002G219100--Sobic009G180900 Sobic004G074400--Sobic009G180900 Sobic004G279400 Sobic004G279400 Sobic004G074400--Sobic004G279400 Sobic003G068150 Sobic003G068150 Sobic004G074400--Sobic003G068150 Sobic002G208700 Sobic002G208700 Sobic004G074400--Sobic002G208700 Sobic004G074400--Sobic002G099932 Sobic004G074400--Sobic008G147600 Sobic004G074400--Sobic009G037500 Sobic007G149500 Sobic007G149500 Sobic004G074400--Sobic007G149500 Sobic004G074400--Sobic002G219100 Sobic001G325100 Sobic001G325100 Sobic001G279800--Sobic001G325100 Sobic001G279800--Sobic002G219100 Sobic008G053500 Sobic008G053500 Sobic001G279800--Sobic008G053500 Sobic008G138850 Sobic008G138850 Sobic001G279800--Sobic008G138850 Sobic001G279800--Sobic009G037500 Sobic006G199601 Sobic006G199601 Sobic001G279800--Sobic006G199601 Sobic010G055900 Sobic010G055900 Sobic001G279800--Sobic010G055900 Sobic003G068200 Sobic003G068200 Sobic001G279800--Sobic003G068200 Sobic001G279800--Sobic005G150700 Sobic009G180900--Sobic004G074400 Sobic006G027800 Sobic006G027800 Sobic009G180900--Sobic006G027800 Sobic004G347833 Sobic004G347833 Sobic009G180900--Sobic004G347833 Sobic009G180900--Sobic008G147600 Sobic009G180900--Sobic004G279400 Sobic009G180900--Sobic002G219100 Sobic009G180900--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic009G180900--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic009G180900--Sobic010G175100 Sobic005G150700--Sobic002G219100 Sobic005G150700--Sobic009G037500 Sobic005G150700--Sobic010G025600 Sobic005G150700--Sobic003G210500 Sobic005G150700--Sobic001G279800 Sobic005G150700--Sobic003G012750 Sobic007G175000 Sobic007G175000 Sobic005G150700--Sobic007G175000 Sobic005G150700--Sobic008G053500 Sobic005G150700--Sobic003G068200 Sobic002G099932--Sobic004G074400 Sobic009G181000 Sobic009G181000 Sobic002G099932--Sobic009G181000 Sobic002G099932--Sobic002G160300 Sobic002G321700 Sobic002G321700 Sobic002G099932--Sobic002G321700 Sobic002G099932--Sobic009G037500 Sobic001G182100 Sobic001G182100 Sobic002G099932--Sobic001G182100 Sobic002G099932--Sobic004G347833 Sobic001G496000 Sobic001G496000 Sobic002G099932--Sobic001G496000 Sobic002G099932--Sobic009G180900 Sobic001G228500 Sobic001G228500 Sobic002G160300--Sobic001G228500 Sobic007G187500 Sobic007G187500 Sobic002G160300--Sobic007G187500 Sobic002G160300--Sobic002G099932 Sobic002G160300--Sobic004G074400 Sobic004G068600 Sobic004G068600 Sobic002G160300--Sobic004G068600 Sobic002G160300--Sobic009G181000 Sobic002G160300--Sobic009G180900 Sobic002G160300--Sobic002G321700 Sobic002G160300--Sobic008G147600 Sobic001G145550 Sobic001G145550 Sobic009G037500--Sobic001G145550 Sobic001G422001 Sobic001G422001 Sobic009G037500--Sobic001G422001 Sobic009G037500--Sobic005G150700 Sobic009G037500--Sobic009G020600 Sobic009G037500--Sobic007G149500 Sobic009G037500--Sobic001G279800 Sobic009G037500--Sobic002G219100 Sobic006G094900 Sobic006G094900 Sobic009G037500--Sobic006G094900 Sobic009G037500--Sobic007G175000
Octagon: transcription factors


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