Gene annotation
Transcriptome id Sobic.002G307600.1
Synonym Sb02g033760
Functional annotation GTPase activating protein, putative, expressed
UniProt C5X978
Pfam PF00168
Panther DB PTHR23180 PTHR23180:SF290
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G48590 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os07g31720.1 : GTPase activating protein, putative, expressed
MaizeGDB (Corn) Zm00025a048097
Brachypodium KQK16114
Barley -
Wheat TraesCS2B02G250500 , TraesCS2B02G250500 , TraesCS2D02G233300 , TraesCS2D02G233300 , TraesCSU02G130300 , TraesCSU02G130300 , TraesCS2A02G229100 , TraesCS2A02G229100 , TraesCS4B02G380100
Populus -


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cDNA sequences
Sobic.002G307600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
3 Sobic.002G416900 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G389100 cytochrome P450 72A1, putative, expressed -
5 Sobic.009G187200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.003G135700 - -
7 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
8 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G114800 - -
10 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
11 Sobic.001G318000 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.008G063400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.002G318100 expressed protein -
14 Sobic.003G016100 expressed protein -
15 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
18 Sobic.009G073800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.003G214100 expressed protein -
20 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic002G307600 Sobic002G307600 Sobic010G067400 Sobic010G067400 Sobic002G307600--Sobic010G067400 Sobic007G127100 Sobic007G127100 Sobic002G307600--Sobic007G127100 Sobic002G416900 Sobic002G416900 Sobic002G307600--Sobic002G416900 Sobic002G389100 Sobic002G389100 Sobic002G307600--Sobic002G389100 Sobic009G187200 Sobic009G187200 Sobic002G307600--Sobic009G187200 Sobic003G135700 Sobic003G135700 Sobic002G307600--Sobic003G135700 Sobic007G169900 Sobic007G169900 Sobic002G307600--Sobic007G169900 Sobic003G416300 Sobic003G416300 Sobic002G307600--Sobic003G416300 Sobic001G114800 Sobic001G114800 Sobic002G307600--Sobic001G114800 Sobic004G046200 Sobic004G046200 Sobic010G067400--Sobic004G046200 Sobic003G016100 Sobic003G016100 Sobic010G067400--Sobic003G016100 Sobic010G067400--Sobic009G187200 Sobic010G067400--Sobic007G169900 Sobic010G184800 Sobic010G184800 Sobic010G067400--Sobic010G184800 Sobic003G079400 Sobic003G079400 Sobic010G067400--Sobic003G079400 Sobic006G277600 Sobic006G277600 Sobic010G067400--Sobic006G277600 Sobic006G044100 Sobic006G044100 Sobic010G067400--Sobic006G044100 Sobic004G310200 Sobic004G310200 Sobic010G067400--Sobic004G310200 Sobic007G127100--Sobic003G416300 Sobic002G327300 Sobic002G327300 Sobic007G127100--Sobic002G327300 Sobic010G008400 Sobic010G008400 Sobic007G127100--Sobic010G008400 Sobic008G128900 Sobic008G128900 Sobic007G127100--Sobic008G128900 Sobic009G065300 Sobic009G065300 Sobic007G127100--Sobic009G065300 Sobic001G432700 Sobic001G432700 Sobic007G127100--Sobic001G432700 Sobic002G407100 Sobic002G407100 Sobic007G127100--Sobic002G407100 Sobic004G064400 Sobic004G064400 Sobic007G127100--Sobic004G064400 Sobic009G121900 Sobic009G121900 Sobic007G127100--Sobic009G121900 Sobic010G106500 Sobic010G106500 Sobic002G416900--Sobic010G106500 Sobic009G106400 Sobic009G106400 Sobic002G416900--Sobic009G106400 Sobic002G416900--Sobic003G016100 Sobic010G271200 Sobic010G271200 Sobic002G416900--Sobic010G271200 Sobic002G416900--Sobic010G067400 Sobic003G360600 Sobic003G360600 Sobic002G416900--Sobic003G360600 Sobic002G416900--Sobic009G187200 Sobic001G318000 Sobic001G318000 Sobic002G416900--Sobic001G318000 Sobic004G349125 Sobic004G349125 Sobic002G416900--Sobic004G349125 Sobic001G508400 Sobic001G508400 Sobic002G389100--Sobic001G508400 Sobic002G416500 Sobic002G416500 Sobic002G389100--Sobic002G416500 Sobic004G261400 Sobic004G261400 Sobic002G389100--Sobic004G261400 Sobic009G073800 Sobic009G073800 Sobic002G389100--Sobic009G073800 Sobic006G012800 Sobic006G012800 Sobic002G389100--Sobic006G012800 Sobic002G389100--Sobic002G307600 Sobic002G389100--Sobic010G067400 Sobic004G126700 Sobic004G126700 Sobic002G389100--Sobic004G126700 Sobic009G158500 Sobic009G158500 Sobic002G389100--Sobic009G158500 Sobic008G172600 Sobic008G172600 Sobic009G187200--Sobic008G172600 Sobic009G187200--Sobic004G046200 Sobic009G187200--Sobic006G044100 Sobic001G128500 Sobic001G128500 Sobic009G187200--Sobic001G128500 Sobic009G187200--Sobic010G067400 Sobic009G187200--Sobic003G016100 Sobic003G255200 Sobic003G255200 Sobic009G187200--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic009G187200--Sobic001G503100 Sobic003G255500 Sobic003G255500 Sobic009G187200--Sobic003G255500 Sobic010G268400 Sobic010G268400 Sobic003G135700--Sobic010G268400 Sobic003G192100 Sobic003G192100 Sobic003G135700--Sobic003G192100 Sobic007G025500 Sobic007G025500 Sobic003G135700--Sobic007G025500 Sobic010G136000 Sobic010G136000 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic001G107400 Sobic001G107400 Sobic003G135700--Sobic001G107400 Sobic002G373001 Sobic002G373001 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400 Sobic001G231700 Sobic001G231700 Sobic007G169900--Sobic001G231700 Sobic007G169900--Sobic004G349125 Sobic006G199800 Sobic006G199800 Sobic007G169900--Sobic006G199800 Sobic007G169900--Sobic010G067400 Sobic007G169900--Sobic009G106400 Sobic003G084400 Sobic003G084400 Sobic007G169900--Sobic003G084400 Sobic007G169900--Sobic010G184800 Sobic001G476500 Sobic001G476500 Sobic007G169900--Sobic001G476500 Sobic007G169900--Sobic004G046200 Sobic005G168800 Sobic005G168800 Sobic003G416300--Sobic005G168800 Sobic003G416300--Sobic002G327300 Sobic003G416300--Sobic004G046200 Sobic003G050200 Sobic003G050200 Sobic003G416300--Sobic003G050200 Sobic002G312900 Sobic002G312900 Sobic003G416300--Sobic002G312900 Sobic003G416300--Sobic007G127100 Sobic003G416300--Sobic003G079400 Sobic008G106700 Sobic008G106700 Sobic003G416300--Sobic008G106700 Sobic001G082600 Sobic001G082600 Sobic003G416300--Sobic001G082600 Sobic003G214100 Sobic003G214100 Sobic001G114800--Sobic003G214100 Sobic003G264400 Sobic003G264400 Sobic001G114800--Sobic003G264400 Sobic002G188900 Sobic002G188900 Sobic001G114800--Sobic002G188900 Sobic004G243100 Sobic004G243100 Sobic001G114800--Sobic004G243100 Sobic002G354100 Sobic002G354100 Sobic001G114800--Sobic002G354100 Sobic001G114800--Sobic001G231700 Sobic001G018300 Sobic001G018300 Sobic001G114800--Sobic001G018300 Sobic001G114800--Sobic006G277600 Sobic003G427800 Sobic003G427800 Sobic001G114800--Sobic003G427800
Octagon: transcription factors


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