Gene annotation
Transcriptome id Sobic.002G363200.2
Synonym Sb02g038300
Functional annotation saccharopine dehydrogenase, putative, expressed
UniProt A0A1W0W792
Pfam PF03435
Panther DB PTHR12286 PTHR12286:SF5
NCBI CDD KOG2733; Uncharacterized membrane protein
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G39410 : Saccharopine dehydrogenase
RAP-DB (Rice) LOC_Os07g40620.1 : saccharopine dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a001419 , Zm00025a048649
Brachypodium KQK15419
Barley HORVU7Hr1G022790.1 , HORVU2Hr1G034380.1 , HORVU2Hr1G034380.2
Wheat TraesCS7A02G108100 , TraesCS7D02G102500 , TraesCSU02G226700 , TraesCS2B02G209000 , TraesCS2D02G190300 , TraesCS2A02G182500
Populus -


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cDNA sequences
Sobic.002G363200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
2 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
3 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.001G147650 - -
6 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
7 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
8 Sobic.005G135400 chalcone synthase, putative, expressed -
9 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.007G095000 cytochrome P450, putative, expressed -
11 Sobic.010G180000 - -
12 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
13 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
14 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.008G138300 expressed protein -
16 Sobic.004G293800 thioesterase family protein, putative, expressed -
17 Sobic.003G040400 cytochrome P450, putative, expressed -
18 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
19 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
20 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic002G363200 Sobic002G363200 Sobic004G167000 Sobic004G167000 Sobic002G363200--Sobic004G167000 Sobic008G087300 Sobic008G087300 Sobic002G363200--Sobic008G087300 Sobic001G266900 Sobic001G266900 Sobic002G363200--Sobic001G266900 Sobic010G108200 Sobic010G108200 Sobic002G363200--Sobic010G108200 Sobic001G147650 Sobic001G147650 Sobic002G363200--Sobic001G147650 Sobic003G071300 Sobic003G071300 Sobic002G363200--Sobic003G071300 Sobic006G125600 Sobic006G125600 Sobic002G363200--Sobic006G125600 Sobic005G135400 Sobic005G135400 Sobic002G363200--Sobic005G135400 Sobic010G159500 Sobic010G159500 Sobic002G363200--Sobic010G159500 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic008G008200 Sobic008G008200 Sobic004G167000--Sobic008G008200 Sobic010G180000 Sobic010G180000 Sobic004G167000--Sobic010G180000 Sobic008G138300 Sobic008G138300 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic003G239400 Sobic003G239400 Sobic004G167000--Sobic003G239400 Sobic003G040400 Sobic003G040400 Sobic004G167000--Sobic003G040400 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic008G087300--Sobic010G159500 Sobic009G239800 Sobic009G239800 Sobic008G087300--Sobic009G239800 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic001G266900--Sobic004G167000 Sobic001G266900--Sobic008G138300 Sobic001G266900--Sobic008G087300 Sobic001G266900--Sobic010G159500 Sobic001G266900--Sobic003G239400 Sobic009G116300 Sobic009G116300 Sobic001G266900--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic001G266900--Sobic003G206000 Sobic010G200000 Sobic010G200000 Sobic001G266900--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic001G266900--Sobic001G332050 Sobic010G108200--Sobic003G071300 Sobic010G108200--Sobic006G125600 Sobic003G071100 Sobic003G071100 Sobic010G108200--Sobic003G071100 Sobic010G108200--Sobic005G135400 Sobic010G124500 Sobic010G124500 Sobic010G108200--Sobic010G124500 Sobic004G293800 Sobic004G293800 Sobic010G108200--Sobic004G293800 Sobic005G135800 Sobic005G135800 Sobic010G108200--Sobic005G135800 Sobic010G108001 Sobic010G108001 Sobic010G108200--Sobic010G108001 Sobic007G095000 Sobic007G095000 Sobic010G108200--Sobic007G095000 Sobic001G147650--Sobic005G135400 Sobic001G147650--Sobic010G159500 Sobic001G147650--Sobic010G108200 Sobic001G147650--Sobic003G071300 Sobic001G147650--Sobic004G293800 Sobic001G147650--Sobic003G071100 Sobic001G147650--Sobic010G108001 Sobic001G147650--Sobic001G332050 Sobic003G071300--Sobic003G071100 Sobic003G071300--Sobic006G125600 Sobic003G071300--Sobic010G108200 Sobic003G071300--Sobic010G124500 Sobic003G071300--Sobic005G135800 Sobic003G071300--Sobic005G135400 Sobic003G071300--Sobic010G108001 Sobic003G071300--Sobic004G293800 Sobic003G071300--Sobic007G095000 Sobic006G125600--Sobic003G071300 Sobic006G125600--Sobic010G124500 Sobic006G125600--Sobic003G071100 Sobic006G125600--Sobic005G135800 Sobic006G125600--Sobic010G108200 Sobic006G125600--Sobic007G095000 Sobic006G125600--Sobic005G135400 Sobic006G125600--Sobic010G108001 Sobic006G125600--Sobic004G293800 Sobic005G135400--Sobic003G071100 Sobic005G135400--Sobic003G071300 Sobic005G135400--Sobic010G159500 Sobic005G135400--Sobic010G108001 Sobic003G206300 Sobic003G206300 Sobic005G135400--Sobic003G206300 Sobic002G129600 Sobic002G129600 Sobic005G135400--Sobic002G129600 Sobic005G135400--Sobic009G116300 Sobic005G135400--Sobic010G200000 Sobic005G135400--Sobic001G332050 Sobic010G159500--Sobic008G138300 Sobic010G159500--Sobic009G116300 Sobic010G159500--Sobic003G206300 Sobic010G159500--Sobic010G200000 Sobic010G159500--Sobic003G206000 Sobic010G159500--Sobic001G332050
Octagon: transcription factors


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