Gene annotation
| Transcriptome id | Sobic.002G407400.1,Sobic.002G407400.2 |
|---|---|
| Synonym | Sb02g042130 |
| Functional annotation | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| UniProt | C5X4U3 , A0A1B6QG24 |
| Pfam | PF13561 |
| Panther DB | PTHR24322 PTHR24322:SF408 |
| NCBI CDD | KOG0725; Reductases with broad range of substrate specificities |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G26760 : NAD(P)-binding Rossmann-fold superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g46840.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a049065 |
| Brachypodium | KQJ83231 |
| Barley | HORVU2Hr1G021320.1 , HORVU2Hr1G021320.2 , HORVU2Hr1G021320.4 , HORVU2Hr1G021320.3 , HORVU2Hr1G021430.1 |
| Wheat | TraesCS2A02G291300 , TraesCS2B02G144200 , TraesCS2D02G289300 , TraesCS7B02G011200 , TraesCS2B02G307700 , TraesCS7D02G108700 , TraesCS2D02G124800 , TraesCS7A02G113400 |
| Populus | - |
JBrowse
| Sobic.002G407400 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G153300 | acyl-desaturase, chloroplast precursor, putative, expressed | K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase |
| 2 | Sobic.002G319832 | - | K08900: mitochondrial chaperone BCS1 |
| 3 | Sobic.001G110950 | - | - |
| 4 | Sobic.001G266500 | LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 5 | Sobic.004G218700 | alcohol oxidase, putative, expressed | K17756: long-chain-alcohol oxidase |
| 6 | Sobic.007G078200 | cycloartenol synthase, putative, expressed | K01853: cycloartenol synthase |
| 7 | Sobic.010G124600 | estradiol 17-beta-dehydrogenase 12, putative, expressed | K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase |
| 8 | Sobic.004G167000 | POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed | - |
| 9 | Sobic.007G162200 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 10 | Sobic.010G157100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed | - |
| 11 | Sobic.010G159500 | LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed | - |
| 12 | Sobic.007G095000 | cytochrome P450, putative, expressed | - |
| 13 | Sobic.008G087300 | 3-oxoacyl-reductase, chloroplast precursor, putative, expressed | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
| 14 | Sobic.001G266900 | LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 15 | Sobic.007G064600 | cytochrome P450, putative, expressed | - |
| 16 | Sobic.008G095150 | - | - |
| 17 | Sobic.006G034200 | wax synthase, putative, expressed | - |
| 18 | Sobic.003G239400 | wax synthase isoform 3, putative, expressed | - |
| 19 | Sobic.008G008200 | TMS membrane protein/tumour differentially expressed protein, putative, expressed | - |
| 20 | Sobic.005G135800 | chalcone and stilbene synthases, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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