Gene annotation
Transcriptome id Sobic.007G078200.1
Synonym CAS1, Sb07g006300
Functional annotation cycloartenol synthase, putative, expressed
UniProt C5YIX2
Pfam PF00432
Panther DB PTHR11764 PTHR11764:SF17
NCBI CDD -
KEGG Orthology K01853; cycloartenol synthase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os02g04710.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) Zm00025a054907
Brachypodium KQJ95610
Barley HORVU7Hr1G000400.1 , HORVU7Hr1G000400.3 , HORVU7Hr1G000400.2 , HORVU7Hr1G000400.5 , HORVU7Hr1G000400.4 , HORVU7Hr1G000400.6
Wheat TraesCS7D02G004000 , TraesCS7D02G004000 , TraesCS7A02G003500 , TraesCS7A02G003500 , TraesCS4A02G495100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
2 Sobic.002G007400 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.001G266500 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G394000 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.001G116300 - -
6 Sobic.004G289200 OsSub43 - Putative Subtilisin homologue, expressed -
7 Sobic.001G377050 - -
8 Sobic.002G429900 PHD finger family protein, putative, expressed -
9 Sobic.001G303750 - -
10 Sobic.004G046100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfotransferase domain containing protein, expressed -
11 Sobic.004G214500 plant protein of unknown function DUF869 domain containing protein, expressed -
12 Sobic.002G129500 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
13 Sobic.005G135000 chalcone synthase, putative, expressed -
14 Sobic.003G179700 beta-galactosidase precursor, putative, expressed -
15 Sobic.007G064600 cytochrome P450, putative, expressed -
16 Sobic.002G129700 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
17 Sobic.010G232000 RIC10, putative, expressed -
18 Sobic.008G126000 calmodulin binding protein, putative, expressed -
19 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
20 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic007G078200 Sobic007G078200 Sobic004G153300 Sobic004G153300 Sobic007G078200--Sobic004G153300 Sobic002G007400 Sobic002G007400 Sobic007G078200--Sobic002G007400 Sobic001G266500 Sobic001G266500 Sobic007G078200--Sobic001G266500 Sobic002G394000 Sobic002G394000 Sobic007G078200--Sobic002G394000 Sobic001G116300 Sobic001G116300 Sobic007G078200--Sobic001G116300 Sobic004G289200 Sobic004G289200 Sobic007G078200--Sobic004G289200 Sobic001G377050 Sobic001G377050 Sobic007G078200--Sobic001G377050 Sobic002G429900 Sobic002G429900 Sobic007G078200--Sobic002G429900 Sobic001G303750 Sobic001G303750 Sobic007G078200--Sobic001G303750 Sobic004G153300--Sobic001G266500 Sobic007G064600 Sobic007G064600 Sobic004G153300--Sobic007G064600 Sobic003G206000 Sobic003G206000 Sobic004G153300--Sobic003G206000 Sobic003G239400 Sobic003G239400 Sobic004G153300--Sobic003G239400 Sobic002G129700 Sobic002G129700 Sobic004G153300--Sobic002G129700 Sobic001G332050 Sobic001G332050 Sobic004G153300--Sobic001G332050 Sobic003G179700 Sobic003G179700 Sobic002G007400--Sobic003G179700 Sobic002G007400--Sobic003G206000 Sobic007G073300 Sobic007G073300 Sobic002G007400--Sobic007G073300 Sobic002G007400--Sobic003G239400 Sobic002G007400--Sobic007G064600 Sobic010G200000 Sobic010G200000 Sobic002G007400--Sobic010G200000 Sobic003G206300 Sobic003G206300 Sobic002G007400--Sobic003G206300 Sobic002G007400--Sobic001G332050 Sobic001G266500--Sobic004G153300 Sobic001G266500--Sobic007G064600 Sobic001G266500--Sobic003G206000 Sobic001G266500--Sobic001G332050 Sobic002G394000--Sobic001G377050 Sobic007G090466 Sobic007G090466 Sobic002G394000--Sobic007G090466 Sobic002G394000--Sobic002G429900 Sobic004G214500 Sobic004G214500 Sobic002G394000--Sobic004G214500 Sobic002G394000--Sobic002G007400 Sobic002G010150 Sobic002G010150 Sobic002G394000--Sobic002G010150 Sobic002G394000--Sobic004G289200 Sobic002G394000--Sobic007G078200 Sobic002G394000--Sobic001G116300 Sobic001G116300--Sobic001G303750 Sobic001G116300--Sobic002G007400 Sobic001G116300--Sobic004G289200 Sobic002G129500 Sobic002G129500 Sobic001G116300--Sobic002G129500 Sobic001G116300--Sobic002G129700 Sobic006G034200 Sobic006G034200 Sobic001G116300--Sobic006G034200 Sobic005G208801 Sobic005G208801 Sobic001G116300--Sobic005G208801 Sobic001G116300--Sobic007G064600 Sobic001G116300--Sobic001G266500 Sobic004G289200--Sobic001G116300 Sobic004G289200--Sobic002G007400 Sobic004G289200--Sobic001G303750 Sobic004G289200--Sobic002G129500 Sobic004G289200--Sobic005G208801 Sobic006G251301 Sobic006G251301 Sobic004G289200--Sobic006G251301 Sobic008G101850 Sobic008G101850 Sobic004G289200--Sobic008G101850 Sobic003G162500 Sobic003G162500 Sobic004G289200--Sobic003G162500 Sobic003G206100 Sobic003G206100 Sobic004G289200--Sobic003G206100 Sobic001G377050--Sobic002G394000 Sobic001G377050--Sobic007G090466 Sobic001G377050--Sobic002G007400 Sobic001G377050--Sobic002G429900 Sobic001G377050--Sobic004G214500 Sobic001G377050--Sobic002G010150 Sobic001G377050--Sobic004G289200 Sobic001G377050--Sobic001G266500 Sobic001G377050--Sobic001G116300 Sobic002G429900--Sobic002G394000 Sobic002G429900--Sobic007G090466 Sobic002G429900--Sobic001G377050 Sobic010G183700 Sobic010G183700 Sobic002G429900--Sobic010G183700 Sobic002G429900--Sobic004G214500 Sobic002G429900--Sobic007G078200 Sobic002G429900--Sobic002G010150 Sobic002G429900--Sobic002G007400 Sobic003G261700 Sobic003G261700 Sobic002G429900--Sobic003G261700 Sobic009G239800 Sobic009G239800 Sobic001G303750--Sobic009G239800 Sobic008G008200 Sobic008G008200 Sobic001G303750--Sobic008G008200 Sobic008G087300 Sobic008G087300 Sobic001G303750--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic001G303750--Sobic004G167000 Sobic001G266900 Sobic001G266900 Sobic001G303750--Sobic001G266900 Sobic001G303750--Sobic002G129500 Sobic001G303750--Sobic002G129700 Sobic001G303750--Sobic007G064600 Sobic010G180000 Sobic010G180000 Sobic001G303750--Sobic010G180000
Octagon: transcription factors


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