Gene annotation
Transcriptome id Sobic.004G046100.1
Synonym Sb04g003950
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
sulfotransferase domain containing protein, expressed
UniProt C5XVB6
Pfam PF13469
Panther DB PTHR11783 PTHR11783:SF80
NCBI CDD KOG1584; Sulfotransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45070 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os11g30910.1 : sulfotransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026022 , Zm00025a026021
Brachypodium KQK05175 , KQJ91403 , KQJ91404 , KQJ81550
Barley HORVU2Hr1G117700.1 , HORVU7Hr1G008150.2 , HORVU7Hr1G008150.1 , HORVU7Hr1G008150.4 , HORVU2Hr1G007990.1 , HORVU2Hr1G117770.1 , HORVU7Hr1G122470.1 , HORVU0Hr1G018890.4 , HORVU3Hr1G094480.1 , HORVU0Hr1G018890.2 , HORVU0Hr1G018890.3 , HORVU0Hr1G018890.1 , HORVU3Hr1G094480.2
Wheat TraesCS6A02G368500 , TraesCS6B02G187000
Populus -


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cDNA sequences
Sobic.004G046100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G229200 receptor-like kinase, putative, expressed -
2 Sobic.007G078200 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
3 Sobic.003G414100 tropinone reductase, putative, expressed K08081: tropinone reductase I
4 Sobic.008G005400 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.001G173100 cytochrome P450, putative, expressed -
6 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
7 Sobic.006G188100 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
8 Sobic.002G267000 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.005G135000 chalcone synthase, putative, expressed -
11 Sobic.002G007400 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.010G232000 RIC10, putative, expressed -
13 Sobic.010G108600 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.002G205100 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
15 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
16 Sobic.001G266500 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.001G303750 - -
19 Sobic.003G179700 beta-galactosidase precursor, putative, expressed -
20 Sobic.003G146200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@two-component response regulator, putative, expressed -


Gene co-expression network
sample Sobic004G046100 Sobic004G046100 Sobic006G229200 Sobic006G229200 Sobic004G046100--Sobic006G229200 Sobic007G078200 Sobic007G078200 Sobic004G046100--Sobic007G078200 Sobic003G414100 Sobic003G414100 Sobic004G046100--Sobic003G414100 Sobic008G005400 Sobic008G005400 Sobic004G046100--Sobic008G005400 Sobic001G173100 Sobic001G173100 Sobic004G046100--Sobic001G173100 Sobic010G108301 Sobic010G108301 Sobic004G046100--Sobic010G108301 Sobic006G188100 Sobic006G188100 Sobic004G046100--Sobic006G188100 Sobic002G267000 Sobic002G267000 Sobic004G046100--Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic004G046100--Sobic007G138800 Sobic003G070300 Sobic003G070300 Sobic006G229200--Sobic003G070300 Sobic010G212600 Sobic010G212600 Sobic006G229200--Sobic010G212600 Sobic006G229200--Sobic008G005400 Sobic003G243400 Sobic003G243400 Sobic006G229200--Sobic003G243400 Sobic006G229200--Sobic004G046100 Sobic006G229200--Sobic003G414100 Sobic006G229200--Sobic006G188100 Sobic010G272400 Sobic010G272400 Sobic006G229200--Sobic010G272400 Sobic009G067200 Sobic009G067200 Sobic006G229200--Sobic009G067200 Sobic004G153300 Sobic004G153300 Sobic007G078200--Sobic004G153300 Sobic002G007400 Sobic002G007400 Sobic007G078200--Sobic002G007400 Sobic001G266500 Sobic001G266500 Sobic007G078200--Sobic001G266500 Sobic002G394000 Sobic002G394000 Sobic007G078200--Sobic002G394000 Sobic001G116300 Sobic001G116300 Sobic007G078200--Sobic001G116300 Sobic004G289200 Sobic004G289200 Sobic007G078200--Sobic004G289200 Sobic001G377050 Sobic001G377050 Sobic007G078200--Sobic001G377050 Sobic002G429900 Sobic002G429900 Sobic007G078200--Sobic002G429900 Sobic001G303750 Sobic001G303750 Sobic007G078200--Sobic001G303750 Sobic003G414100--Sobic008G005400 Sobic003G414100--Sobic010G108301 Sobic003G414100--Sobic006G188100 Sobic003G414100--Sobic002G267000 Sobic003G414100--Sobic007G138800 Sobic003G414100--Sobic001G173100 Sobic005G135000 Sobic005G135000 Sobic003G414100--Sobic005G135000 Sobic010G108600 Sobic010G108600 Sobic003G414100--Sobic010G108600 Sobic010G108100 Sobic010G108100 Sobic003G414100--Sobic010G108100 Sobic008G005400--Sobic010G108301 Sobic008G005400--Sobic002G267000 Sobic008G005400--Sobic003G414100 Sobic008G005400--Sobic007G138800 Sobic008G005400--Sobic006G188100 Sobic008G005400--Sobic005G135000 Sobic008G005400--Sobic010G108600 Sobic008G005400--Sobic010G108100 Sobic008G005400--Sobic001G173100 Sobic001G173100--Sobic007G138800 Sobic001G173100--Sobic010G108600 Sobic001G173100--Sobic002G267000 Sobic007G095000 Sobic007G095000 Sobic001G173100--Sobic007G095000 Sobic001G173100--Sobic010G108301 Sobic001G173100--Sobic010G108100 Sobic001G173100--Sobic005G135000 Sobic005G135800 Sobic005G135800 Sobic001G173100--Sobic005G135800 Sobic010G124500 Sobic010G124500 Sobic001G173100--Sobic010G124500 Sobic010G108301--Sobic002G267000 Sobic010G108301--Sobic007G138800 Sobic010G108301--Sobic010G108600 Sobic010G108301--Sobic005G135000 Sobic010G108301--Sobic008G005400 Sobic010G108301--Sobic010G108100 Sobic010G108301--Sobic001G173100 Sobic010G108301--Sobic007G095000 Sobic004G293800 Sobic004G293800 Sobic010G108301--Sobic004G293800 Sobic006G188100--Sobic008G005400 Sobic006G188100--Sobic010G108301 Sobic006G188100--Sobic003G414100 Sobic006G188100--Sobic002G267000 Sobic001G510000 Sobic001G510000 Sobic006G188100--Sobic001G510000 Sobic006G188100--Sobic007G138800 Sobic006G188100--Sobic005G135000 Sobic006G188100--Sobic001G173100 Sobic006G188100--Sobic010G108600 Sobic002G267000--Sobic007G138800 Sobic002G267000--Sobic010G108301 Sobic002G267000--Sobic010G108600 Sobic002G267000--Sobic005G135000 Sobic002G267000--Sobic010G108100 Sobic002G267000--Sobic004G293800 Sobic002G267000--Sobic005G135800 Sobic002G267000--Sobic010G124500 Sobic002G267000--Sobic007G095000 Sobic007G138800--Sobic002G267000 Sobic007G138800--Sobic010G108600 Sobic007G138800--Sobic010G108301 Sobic007G138800--Sobic005G135000 Sobic007G138800--Sobic010G108100 Sobic007G138800--Sobic005G135800 Sobic007G138800--Sobic010G124500 Sobic007G138800--Sobic007G095000 Sobic007G195500 Sobic007G195500 Sobic007G138800--Sobic007G195500
Octagon: transcription factors


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