Gene annotation
Transcriptome id Sobic.004G214500.2,Sobic.004G214500.1
Synonym Sb04g025980
Functional annotation plant protein of unknown function DUF869 domain containing protein, expressed
UniProt C5XXM9
Pfam PF05911
Panther DB PTHR31580 PTHR31580:SF6
NCBI CDD KOG0250; DNA repair protein RAD18 (SMC family protein)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23360 : Plant protein of unknown function (DUF869)
RAP-DB (Rice) LOC_Os02g40100.1 : plant protein of unknown function DUF869 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021171
Brachypodium KQK00336 , KQK00335
Barley -
Wheat TraesCS6A02G229200 , TraesCS6A02G229200 , TraesCS6B02G252300 , TraesCS6D02G205600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G394000 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.001G377050 - -
3 Sobic.007G090466 - -
4 Sobic.002G010150 - -
5 Sobic.002G429900 PHD finger family protein, putative, expressed -
6 Sobic.002G007400 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.007G078200 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
9 Sobic.010G108200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.001G266500 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
12 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
13 Sobic.004G153300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
14 Sobic.001G116300 - -
15 Sobic.010G124500 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
16 Sobic.004G289200 OsSub43 - Putative Subtilisin homologue, expressed -
17 Sobic.010G108001 - K15397: 3-ketoacyl-CoA synthase
18 Sobic.003G071100 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
19 Sobic.005G135800 chalcone and stilbene synthases, putative, expressed -
20 Sobic.005G135400 chalcone synthase, putative, expressed -


Gene co-expression network
sample Sobic004G214500 Sobic004G214500 Sobic002G394000 Sobic002G394000 Sobic004G214500--Sobic002G394000 Sobic001G377050 Sobic001G377050 Sobic004G214500--Sobic001G377050 Sobic007G090466 Sobic007G090466 Sobic004G214500--Sobic007G090466 Sobic002G010150 Sobic002G010150 Sobic004G214500--Sobic002G010150 Sobic002G429900 Sobic002G429900 Sobic004G214500--Sobic002G429900 Sobic002G007400 Sobic002G007400 Sobic004G214500--Sobic002G007400 Sobic002G394700 Sobic002G394700 Sobic004G214500--Sobic002G394700 Sobic007G078200 Sobic007G078200 Sobic004G214500--Sobic007G078200 Sobic010G108200 Sobic010G108200 Sobic004G214500--Sobic010G108200 Sobic002G394000--Sobic001G377050 Sobic002G394000--Sobic007G090466 Sobic002G394000--Sobic002G429900 Sobic002G394000--Sobic004G214500 Sobic002G394000--Sobic002G007400 Sobic002G394000--Sobic002G010150 Sobic004G289200 Sobic004G289200 Sobic002G394000--Sobic004G289200 Sobic002G394000--Sobic007G078200 Sobic001G116300 Sobic001G116300 Sobic002G394000--Sobic001G116300 Sobic001G377050--Sobic002G394000 Sobic001G377050--Sobic007G090466 Sobic001G377050--Sobic002G007400 Sobic001G377050--Sobic002G429900 Sobic001G377050--Sobic004G214500 Sobic001G377050--Sobic002G010150 Sobic001G377050--Sobic004G289200 Sobic001G266500 Sobic001G266500 Sobic001G377050--Sobic001G266500 Sobic001G377050--Sobic001G116300 Sobic007G090466--Sobic002G394000 Sobic007G090466--Sobic001G377050 Sobic007G090466--Sobic002G429900 Sobic007G090466--Sobic004G214500 Sobic007G090466--Sobic002G010150 Sobic007G090466--Sobic002G007400 Sobic003G261700 Sobic003G261700 Sobic007G090466--Sobic003G261700 Sobic010G183700 Sobic010G183700 Sobic007G090466--Sobic010G183700 Sobic007G090466--Sobic004G289200 Sobic002G010150--Sobic002G394000 Sobic002G010150--Sobic001G377050 Sobic002G010150--Sobic004G214500 Sobic002G010150--Sobic007G090466 Sobic002G010150--Sobic002G429900 Sobic002G010150--Sobic002G007400 Sobic005G135000 Sobic005G135000 Sobic002G010150--Sobic005G135000 Sobic003G414100 Sobic003G414100 Sobic002G010150--Sobic003G414100 Sobic010G232000 Sobic010G232000 Sobic002G010150--Sobic010G232000 Sobic002G429900--Sobic002G394000 Sobic002G429900--Sobic007G090466 Sobic002G429900--Sobic001G377050 Sobic002G429900--Sobic010G183700 Sobic002G429900--Sobic004G214500 Sobic002G429900--Sobic007G078200 Sobic002G429900--Sobic002G010150 Sobic002G429900--Sobic002G007400 Sobic002G429900--Sobic003G261700 Sobic003G179700 Sobic003G179700 Sobic002G007400--Sobic003G179700 Sobic003G206000 Sobic003G206000 Sobic002G007400--Sobic003G206000 Sobic007G073300 Sobic007G073300 Sobic002G007400--Sobic007G073300 Sobic003G239400 Sobic003G239400 Sobic002G007400--Sobic003G239400 Sobic007G064600 Sobic007G064600 Sobic002G007400--Sobic007G064600 Sobic010G200000 Sobic010G200000 Sobic002G007400--Sobic010G200000 Sobic003G206300 Sobic003G206300 Sobic002G007400--Sobic003G206300 Sobic001G332050 Sobic001G332050 Sobic002G007400--Sobic001G332050 Sobic002G394700--Sobic010G108200 Sobic006G125600 Sobic006G125600 Sobic002G394700--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic002G394700--Sobic003G071300 Sobic007G095000 Sobic007G095000 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic010G108600 Sobic010G108600 Sobic002G394700--Sobic010G108600 Sobic004G153300 Sobic004G153300 Sobic007G078200--Sobic004G153300 Sobic007G078200--Sobic002G007400 Sobic007G078200--Sobic001G266500 Sobic007G078200--Sobic002G394000 Sobic007G078200--Sobic001G116300 Sobic007G078200--Sobic004G289200 Sobic007G078200--Sobic001G377050 Sobic007G078200--Sobic002G429900 Sobic001G303750 Sobic001G303750 Sobic007G078200--Sobic001G303750 Sobic010G108200--Sobic003G071300 Sobic010G108200--Sobic006G125600 Sobic010G108200--Sobic003G071100 Sobic010G108200--Sobic005G135400 Sobic010G108200--Sobic010G124500 Sobic004G293800 Sobic004G293800 Sobic010G108200--Sobic004G293800 Sobic010G108200--Sobic005G135800 Sobic010G108001 Sobic010G108001 Sobic010G108200--Sobic010G108001 Sobic010G108200--Sobic007G095000
Octagon: transcription factors


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