Gene annotation
Transcriptome id Sobic.003G025400.1,Sobic.003G025400.2
Synonym
Functional annotation -
UniProt A0A1B6Q135
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G469300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cupin domain containing protein, expressed -
2 Sobic.006G155300 aquaporin protein, putative, expressed K09873: aquaporin TIP
3 Sobic.002G212100 - -
4 Sobic.007G197500 expressed protein -
5 Sobic.002G305300 expressed protein -
6 Sobic.001G498900 expressed protein -
7 Sobic.006G076100 - -
8 Sobic.004G322500 - -
9 Sobic.006G210500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, group 3, putative, expressed -
10 Sobic.002G366300 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
12 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
13 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
14 Sobic.002G327600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
15 Sobic.007G218900 expressed protein -
16 Sobic.001G120600 - -
17 Sobic.001G164800 B3 DNA binding domain containing protein, expressed -
18 Sobic.010G179300 - -
19 Sobic.004G065850 - -
20 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G025400 Sobic003G025400 Sobic001G469300 Sobic001G469300 Sobic003G025400--Sobic001G469300 Sobic006G155300 Sobic006G155300 Sobic003G025400--Sobic006G155300 Sobic002G212100 Sobic002G212100 Sobic003G025400--Sobic002G212100 Sobic007G197500 Sobic007G197500 Sobic003G025400--Sobic007G197500 Sobic002G305300 Sobic002G305300 Sobic003G025400--Sobic002G305300 Sobic001G498900 Sobic001G498900 Sobic003G025400--Sobic001G498900 Sobic006G076100 Sobic006G076100 Sobic003G025400--Sobic006G076100 Sobic004G322500 Sobic004G322500 Sobic003G025400--Sobic004G322500 Sobic006G210500 Sobic006G210500 Sobic003G025400--Sobic006G210500 Sobic001G469300--Sobic006G155300 Sobic001G469300--Sobic006G210500 Sobic001G505900 Sobic001G505900 Sobic001G469300--Sobic001G505900 Sobic001G469300--Sobic004G322500 Sobic001G313100 Sobic001G313100 Sobic001G469300--Sobic001G313100 Sobic001G469300--Sobic007G197500 Sobic003G270200 Sobic003G270200 Sobic001G469300--Sobic003G270200 Sobic001G164700 Sobic001G164700 Sobic001G469300--Sobic001G164700 Sobic002G416300 Sobic002G416300 Sobic001G469300--Sobic002G416300 Sobic006G155300--Sobic001G469300 Sobic006G155300--Sobic006G210500 Sobic006G155300--Sobic001G505900 Sobic006G155300--Sobic007G197500 Sobic006G155300--Sobic004G322500 Sobic006G155300--Sobic003G270200 Sobic006G155300--Sobic001G313100 Sobic006G155300--Sobic002G212100 Sobic003G215600 Sobic003G215600 Sobic006G155300--Sobic003G215600 Sobic002G212100--Sobic006G155300 Sobic002G212100--Sobic001G469300 Sobic002G212100--Sobic006G076100 Sobic002G212100--Sobic007G197500 Sobic002G212100--Sobic004G322500 Sobic002G327600 Sobic002G327600 Sobic002G212100--Sobic002G327600 Sobic002G212100--Sobic006G210500 Sobic002G212100--Sobic003G215600 Sobic002G212100--Sobic003G025400 Sobic010G256100 Sobic010G256100 Sobic007G197500--Sobic010G256100 Sobic007G197500--Sobic001G498900 Sobic005G165700 Sobic005G165700 Sobic007G197500--Sobic005G165700 Sobic002G374500 Sobic002G374500 Sobic007G197500--Sobic002G374500 Sobic007G008500 Sobic007G008500 Sobic007G197500--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic007G197500--Sobic004G091600 Sobic010G007800 Sobic010G007800 Sobic007G197500--Sobic010G007800 Sobic001G164800 Sobic001G164800 Sobic007G197500--Sobic001G164800 Sobic005G167650 Sobic005G167650 Sobic007G197500--Sobic005G167650 Sobic010G179300 Sobic010G179300 Sobic002G305300--Sobic010G179300 Sobic001G122600 Sobic001G122600 Sobic002G305300--Sobic001G122600 Sobic006G248000 Sobic006G248000 Sobic001G498900--Sobic006G248000 Sobic001G498900--Sobic005G165700 Sobic010G198900 Sobic010G198900 Sobic001G498900--Sobic010G198900 Sobic002G211300 Sobic002G211300 Sobic001G498900--Sobic002G211300 Sobic009G037100 Sobic009G037100 Sobic001G498900--Sobic009G037100 Sobic010G125000 Sobic010G125000 Sobic001G498900--Sobic010G125000 Sobic003G372600 Sobic003G372600 Sobic001G498900--Sobic003G372600 Sobic002G046000 Sobic002G046000 Sobic001G498900--Sobic002G046000 Sobic001G498900--Sobic007G008500 Sobic010G111450 Sobic010G111450 Sobic006G076100--Sobic010G111450 Sobic002G040201 Sobic002G040201 Sobic006G076100--Sobic002G040201 Sobic003G013950 Sobic003G013950 Sobic006G076100--Sobic003G013950 Sobic002G251050 Sobic002G251050 Sobic006G076100--Sobic002G251050 Sobic001G463600 Sobic001G463600 Sobic006G076100--Sobic001G463600 Sobic002G394466 Sobic002G394466 Sobic006G076100--Sobic002G394466 Sobic004G138600 Sobic004G138600 Sobic006G076100--Sobic004G138600 Sobic003G407950 Sobic003G407950 Sobic006G076100--Sobic003G407950 Sobic009G187150 Sobic009G187150 Sobic006G076100--Sobic009G187150 Sobic004G020150 Sobic004G020150 Sobic004G322500--Sobic004G020150 Sobic004G322500--Sobic001G469300 Sobic004G322500--Sobic006G155300 Sobic004G322500--Sobic001G505900 Sobic004G322500--Sobic001G313100 Sobic007G218900 Sobic007G218900 Sobic004G322500--Sobic007G218900 Sobic009G239400 Sobic009G239400 Sobic004G322500--Sobic009G239400 Sobic001G242400 Sobic001G242400 Sobic004G322500--Sobic001G242400 Sobic004G322500--Sobic001G164700 Sobic006G210500--Sobic003G270200 Sobic006G210500--Sobic006G155300 Sobic006G210500--Sobic001G469300 Sobic010G041900 Sobic010G041900 Sobic006G210500--Sobic010G041900 Sobic006G210500--Sobic007G197500 Sobic003G130400 Sobic003G130400 Sobic006G210500--Sobic003G130400 Sobic006G210500--Sobic001G505900 Sobic006G143600 Sobic006G143600 Sobic006G210500--Sobic006G143600 Sobic004G092700 Sobic004G092700 Sobic006G210500--Sobic004G092700
Octagon: transcription factors


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