Gene annotation
Transcriptome id Sobic.001G469300.1
Synonym Sb01g043980
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
cupin domain containing protein, expressed
UniProt C5WUN6
Pfam PF00190
Panther DB PTHR31189 PTHR31189:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36700 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os03g10110.1 : cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053170
Brachypodium KQK23112
Barley HORVU4Hr1G070970.7 , HORVU4Hr1G070970.6 , HORVU4Hr1G070970.1 , HORVU4Hr1G070970.3 , HORVU4Hr1G070970.2
Wheat TraesCS4D02G262800 , TraesCS4D02G262800 , TraesCS4D02G262800 , TraesCS4A02G041700 , TraesCS4A02G041700
Populus -


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cDNA sequences
Sobic.001G469300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G155300 aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.006G210500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, group 3, putative, expressed -
3 Sobic.001G505900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.004G322500 - -
5 Sobic.001G313100 CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.007G197500 expressed protein -
7 Sobic.003G270200 dehydrin family protein, expressed -
8 Sobic.001G164700 expressed protein -
9 Sobic.002G416300 RING-H2 finger protein ATL5G, putative, expressed -
10 Sobic.002G212100 - -
11 Sobic.003G215600 pleiotropic drug resistance protein, putative, expressed -
12 Sobic.003G392350 - -
13 Sobic.004G065850 - -
14 Sobic.001G498900 expressed protein -
15 Sobic.001G177400 frigida, putative, expressed -
16 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
17 Sobic.004G020150 - -
18 Sobic.002G374500 - -
19 Sobic.010G041900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dehydrin, putative, expressed -
20 Sobic.007G218900 expressed protein -


Gene co-expression network
sample Sobic001G469300 Sobic001G469300 Sobic006G155300 Sobic006G155300 Sobic001G469300--Sobic006G155300 Sobic006G210500 Sobic006G210500 Sobic001G469300--Sobic006G210500 Sobic001G505900 Sobic001G505900 Sobic001G469300--Sobic001G505900 Sobic004G322500 Sobic004G322500 Sobic001G469300--Sobic004G322500 Sobic001G313100 Sobic001G313100 Sobic001G469300--Sobic001G313100 Sobic007G197500 Sobic007G197500 Sobic001G469300--Sobic007G197500 Sobic003G270200 Sobic003G270200 Sobic001G469300--Sobic003G270200 Sobic001G164700 Sobic001G164700 Sobic001G469300--Sobic001G164700 Sobic002G416300 Sobic002G416300 Sobic001G469300--Sobic002G416300 Sobic006G155300--Sobic001G469300 Sobic006G155300--Sobic006G210500 Sobic006G155300--Sobic001G505900 Sobic006G155300--Sobic007G197500 Sobic006G155300--Sobic004G322500 Sobic006G155300--Sobic003G270200 Sobic006G155300--Sobic001G313100 Sobic002G212100 Sobic002G212100 Sobic006G155300--Sobic002G212100 Sobic003G215600 Sobic003G215600 Sobic006G155300--Sobic003G215600 Sobic006G210500--Sobic003G270200 Sobic006G210500--Sobic006G155300 Sobic006G210500--Sobic001G469300 Sobic010G041900 Sobic010G041900 Sobic006G210500--Sobic010G041900 Sobic006G210500--Sobic007G197500 Sobic003G130400 Sobic003G130400 Sobic006G210500--Sobic003G130400 Sobic006G210500--Sobic001G505900 Sobic006G143600 Sobic006G143600 Sobic006G210500--Sobic006G143600 Sobic004G092700 Sobic004G092700 Sobic006G210500--Sobic004G092700 Sobic001G505900--Sobic001G313100 Sobic001G505900--Sobic006G155300 Sobic001G505900--Sobic001G469300 Sobic001G505900--Sobic004G322500 Sobic001G505900--Sobic006G210500 Sobic008G012800 Sobic008G012800 Sobic001G505900--Sobic008G012800 Sobic001G505900--Sobic002G416300 Sobic007G064400 Sobic007G064400 Sobic001G505900--Sobic007G064400 Sobic004G065850 Sobic004G065850 Sobic001G505900--Sobic004G065850 Sobic004G020150 Sobic004G020150 Sobic004G322500--Sobic004G020150 Sobic004G322500--Sobic001G469300 Sobic004G322500--Sobic006G155300 Sobic004G322500--Sobic001G505900 Sobic004G322500--Sobic001G313100 Sobic007G218900 Sobic007G218900 Sobic004G322500--Sobic007G218900 Sobic009G239400 Sobic009G239400 Sobic004G322500--Sobic009G239400 Sobic001G242400 Sobic001G242400 Sobic004G322500--Sobic001G242400 Sobic004G322500--Sobic001G164700 Sobic001G313100--Sobic001G505900 Sobic001G313100--Sobic001G469300 Sobic001G313100--Sobic004G322500 Sobic001G313100--Sobic006G155300 Sobic001G313100--Sobic004G065850 Sobic006G011800 Sobic006G011800 Sobic001G313100--Sobic006G011800 Sobic001G313100--Sobic004G020150 Sobic001G313100--Sobic006G210500 Sobic009G029900 Sobic009G029900 Sobic001G313100--Sobic009G029900 Sobic010G256100 Sobic010G256100 Sobic007G197500--Sobic010G256100 Sobic001G498900 Sobic001G498900 Sobic007G197500--Sobic001G498900 Sobic005G165700 Sobic005G165700 Sobic007G197500--Sobic005G165700 Sobic002G374500 Sobic002G374500 Sobic007G197500--Sobic002G374500 Sobic007G008500 Sobic007G008500 Sobic007G197500--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic007G197500--Sobic004G091600 Sobic010G007800 Sobic010G007800 Sobic007G197500--Sobic010G007800 Sobic001G164800 Sobic001G164800 Sobic007G197500--Sobic001G164800 Sobic005G167650 Sobic005G167650 Sobic007G197500--Sobic005G167650 Sobic003G270200--Sobic010G041900 Sobic003G270200--Sobic004G092700 Sobic003G270200--Sobic006G210500 Sobic003G270200--Sobic003G130400 Sobic002G317500 Sobic002G317500 Sobic003G270200--Sobic002G317500 Sobic003G270200--Sobic006G143600 Sobic002G185100 Sobic002G185100 Sobic003G270200--Sobic002G185100 Sobic007G162700 Sobic007G162700 Sobic003G270200--Sobic007G162700 Sobic009G104600 Sobic009G104600 Sobic003G270200--Sobic009G104600 Sobic010G090850 Sobic010G090850 Sobic001G164700--Sobic010G090850 Sobic001G297900 Sobic001G297900 Sobic001G164700--Sobic001G297900 Sobic010G246300 Sobic010G246300 Sobic001G164700--Sobic010G246300 Sobic002G055000 Sobic002G055000 Sobic001G164700--Sobic002G055000 Sobic001G480900 Sobic001G480900 Sobic001G164700--Sobic001G480900 Sobic008G030801 Sobic008G030801 Sobic001G164700--Sobic008G030801 Sobic002G266700 Sobic002G266700 Sobic001G164700--Sobic002G266700 Sobic010G011500 Sobic010G011500 Sobic001G164700--Sobic010G011500 Sobic003G089500 Sobic003G089500 Sobic001G164700--Sobic003G089500 Sobic006G210600 Sobic006G210600 Sobic002G416300--Sobic006G210600 Sobic002G240300 Sobic002G240300 Sobic002G416300--Sobic002G240300 Sobic008G102050 Sobic008G102050 Sobic002G416300--Sobic008G102050 Sobic002G416300--Sobic001G505900 Sobic002G416300--Sobic001G164700 Sobic002G416300--Sobic006G210500 Sobic002G416300--Sobic010G090850 Sobic002G416300--Sobic001G469300 Sobic002G416300--Sobic006G155300
Octagon: transcription factors


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