Gene annotation
Transcriptome id Sobic.002G416300.1
Synonym Sb02g042800
Functional annotation RING-H2 finger protein ATL5G, putative, expressed
UniProt C5X5J9
Pfam PF13639
Panther DB PTHR14155
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G62690 : AtL5
RAP-DB (Rice) LOC_Os02g57460.1 : RING-H2 finger protein ATL5G, putative, expressed
MaizeGDB (Corn) Zm00025a015426
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G210600 expressed protein -
2 Sobic.002G240300 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
3 Sobic.008G102050 - -
4 Sobic.001G505900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.001G164700 expressed protein -
6 Sobic.006G210500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, group 3, putative, expressed -
7 Sobic.010G090850 - -
8 Sobic.001G469300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cupin domain containing protein, expressed -
9 Sobic.006G155300 aquaporin protein, putative, expressed K09873: aquaporin TIP
10 Sobic.001G371650 - -
11 Sobic.010G215201 - -
12 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
13 Sobic.002G132201 - -
14 Sobic.007G032200 - -
15 Sobic.007G156400 Up-reguralion under drought(PubMedID : 24916767)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
16 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
17 Sobic.004G282200 DUF623 domain containing protein, expressed -
18 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -
19 Sobic.009G022600 - -
20 Sobic.007G072700 - -


Gene co-expression network
sample Sobic002G416300 Sobic002G416300 Sobic006G210600 Sobic006G210600 Sobic002G416300--Sobic006G210600 Sobic002G240300 Sobic002G240300 Sobic002G416300--Sobic002G240300 Sobic008G102050 Sobic008G102050 Sobic002G416300--Sobic008G102050 Sobic001G505900 Sobic001G505900 Sobic002G416300--Sobic001G505900 Sobic001G164700 Sobic001G164700 Sobic002G416300--Sobic001G164700 Sobic006G210500 Sobic006G210500 Sobic002G416300--Sobic006G210500 Sobic010G090850 Sobic010G090850 Sobic002G416300--Sobic010G090850 Sobic001G469300 Sobic001G469300 Sobic002G416300--Sobic001G469300 Sobic006G155300 Sobic006G155300 Sobic002G416300--Sobic006G155300 Sobic006G210600--Sobic002G240300 Sobic006G155400 Sobic006G155400 Sobic006G210600--Sobic006G155400 Sobic005G150250 Sobic005G150250 Sobic006G210600--Sobic005G150250 Sobic002G132201 Sobic002G132201 Sobic006G210600--Sobic002G132201 Sobic009G022600 Sobic009G022600 Sobic006G210600--Sobic009G022600 Sobic005G073300 Sobic005G073300 Sobic006G210600--Sobic005G073300 Sobic003G149700 Sobic003G149700 Sobic006G210600--Sobic003G149700 Sobic002G054800 Sobic002G054800 Sobic006G210600--Sobic002G054800 Sobic010G215201 Sobic010G215201 Sobic006G210600--Sobic010G215201 Sobic002G240300--Sobic006G210600 Sobic002G240300--Sobic006G155400 Sobic002G240300--Sobic005G150250 Sobic006G222200 Sobic006G222200 Sobic002G240300--Sobic006G222200 Sobic001G221750 Sobic001G221750 Sobic002G240300--Sobic001G221750 Sobic002G240300--Sobic003G149700 Sobic002G033100 Sobic002G033100 Sobic002G240300--Sobic002G033100 Sobic003G356500 Sobic003G356500 Sobic002G240300--Sobic003G356500 Sobic001G112300 Sobic001G112300 Sobic002G240300--Sobic001G112300 Sobic001G495850 Sobic001G495850 Sobic008G102050--Sobic001G495850 Sobic001G388100 Sobic001G388100 Sobic008G102050--Sobic001G388100 Sobic002G231100 Sobic002G231100 Sobic008G102050--Sobic002G231100 Sobic006G084100 Sobic006G084100 Sobic008G102050--Sobic006G084100 Sobic009G150800 Sobic009G150800 Sobic008G102050--Sobic009G150800 Sobic008G102050--Sobic002G240300 Sobic002G138000 Sobic002G138000 Sobic008G102050--Sobic002G138000 Sobic008G102050--Sobic002G416300 Sobic003G241400 Sobic003G241400 Sobic008G102050--Sobic003G241400 Sobic001G313100 Sobic001G313100 Sobic001G505900--Sobic001G313100 Sobic001G505900--Sobic006G155300 Sobic001G505900--Sobic001G469300 Sobic004G322500 Sobic004G322500 Sobic001G505900--Sobic004G322500 Sobic001G505900--Sobic006G210500 Sobic008G012800 Sobic008G012800 Sobic001G505900--Sobic008G012800 Sobic001G505900--Sobic002G416300 Sobic007G064400 Sobic007G064400 Sobic001G505900--Sobic007G064400 Sobic004G065850 Sobic004G065850 Sobic001G505900--Sobic004G065850 Sobic001G164700--Sobic010G090850 Sobic001G297900 Sobic001G297900 Sobic001G164700--Sobic001G297900 Sobic010G246300 Sobic010G246300 Sobic001G164700--Sobic010G246300 Sobic002G055000 Sobic002G055000 Sobic001G164700--Sobic002G055000 Sobic001G480900 Sobic001G480900 Sobic001G164700--Sobic001G480900 Sobic008G030801 Sobic008G030801 Sobic001G164700--Sobic008G030801 Sobic002G266700 Sobic002G266700 Sobic001G164700--Sobic002G266700 Sobic010G011500 Sobic010G011500 Sobic001G164700--Sobic010G011500 Sobic003G089500 Sobic003G089500 Sobic001G164700--Sobic003G089500 Sobic003G270200 Sobic003G270200 Sobic006G210500--Sobic003G270200 Sobic006G210500--Sobic006G155300 Sobic006G210500--Sobic001G469300 Sobic010G041900 Sobic010G041900 Sobic006G210500--Sobic010G041900 Sobic007G197500 Sobic007G197500 Sobic006G210500--Sobic007G197500 Sobic003G130400 Sobic003G130400 Sobic006G210500--Sobic003G130400 Sobic006G210500--Sobic001G505900 Sobic006G143600 Sobic006G143600 Sobic006G210500--Sobic006G143600 Sobic004G092700 Sobic004G092700 Sobic006G210500--Sobic004G092700 Sobic010G090850--Sobic008G030801 Sobic010G090850--Sobic010G215201 Sobic010G090850--Sobic001G297900 Sobic010G090850--Sobic002G055000 Sobic010G090850--Sobic001G480900 Sobic006G049633 Sobic006G049633 Sobic010G090850--Sobic006G049633 Sobic010G090850--Sobic010G011500 Sobic001G071500 Sobic001G071500 Sobic010G090850--Sobic001G071500 Sobic004G296750 Sobic004G296750 Sobic010G090850--Sobic004G296750 Sobic001G469300--Sobic006G155300 Sobic001G469300--Sobic006G210500 Sobic001G469300--Sobic001G505900 Sobic001G469300--Sobic004G322500 Sobic001G469300--Sobic001G313100 Sobic001G469300--Sobic007G197500 Sobic001G469300--Sobic003G270200 Sobic001G469300--Sobic001G164700 Sobic001G469300--Sobic002G416300 Sobic006G155300--Sobic001G469300 Sobic006G155300--Sobic006G210500 Sobic006G155300--Sobic001G505900 Sobic006G155300--Sobic007G197500 Sobic006G155300--Sobic004G322500 Sobic006G155300--Sobic003G270200 Sobic006G155300--Sobic001G313100 Sobic002G212100 Sobic002G212100 Sobic006G155300--Sobic002G212100 Sobic003G215600 Sobic003G215600 Sobic006G155300--Sobic003G215600
Octagon: transcription factors


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