Gene annotation
Transcriptome id Sobic.003G111800.1,Sobic.003G111800.2
Synonym EXPA17, ATHEXPALPHA1.13, ATEXPA17, ATEXP17
Functional annotation expansin precursor, putative, expressed
UniProt A0A1W0VWV1 , A0A1B6Q2N3
Pfam PF03330
Panther DB PTHR31867 PTHR31867:SF32 PTHR31867 PTHR31867:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05290 : expansin A2,expansin A17
RAP-DB (Rice) LOC_Os01g14650.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043994 , Zm00025a023908 , Zm00025a008818 , Zm00025a006815 , Zm00025a006817 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019849 , Zm00025a053441
Brachypodium KQJ96856 , KQJ96857 , KQJ96854 , KQJ96855 , KQK23578 , KQK23579 , KQK10365 , KQK05753
Barley HORVU1Hr1G036910.1 , HORVU1Hr1G069830.3 , HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.4 , HORVU3Hr1G081180.4 , HORVU3Hr1G081180.3 , HORVU3Hr1G081180.2 , HORVU3Hr1G081180.1 , HORVU1Hr1G051620.1 , HORVU1Hr1G051620.3 , HORVU1Hr1G051620.2 , HORVU1Hr1G051590.2 , HORVU1Hr1G051590.1 , HORVU3Hr1G081230.9 , HORVU3Hr1G081230.8 , HORVU3Hr1G081230.5 , HORVU3Hr1G081230.3 , HORVU3Hr1G081230.2 , HORVU5Hr1G113580.4 , HORVU1Hr1G051640.1 , HORVU3Hr1G075210.1 , HORVU3Hr1G075210.2 , HORVU2Hr1G010800.1 , HORVU5Hr1G113580.5 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU2Hr1G010800.2
Wheat TraesCS3D02G338400 , TraesCS2D02G065000 , TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4A02G339200 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS5A02G443400 , TraesCS3B02G376800 , TraesCS1D02G139200 , TraesCS1D02G299700 , TraesCS2B02G078800 , TraesCS2A02G066600 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS1B02G214200 , TraesCS5B02G548500 , TraesCS4A02G034300 , TraesCS5B02G448000 , TraesCS1D02G203100 , TraesCS5D02G450900 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS3A02G344800 , TraesCS4D02G270400 , TraesCS1A02G199400 , TraesCS5B02G494400 , TraesCS3B02G376900 , TraesCS3D02G338600 , TraesCS1A02G199300 , TraesCS1B02G214300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G059400 transferase family protein, putative, expressed -
2 Sobic.006G278950 - -
3 Sobic.008G096500 plant protein of unknown function domain containing protein, expressed -
4 Sobic.007G055400 expressed protein -
5 Sobic.006G084100 expressed protein -
6 Sobic.003G242600 - -
7 Sobic.001G211000 RIPER3 - Ripening-related family protein precursor, putative, expressed -
8 Sobic.010G090800 no apical meristem protein, expressed -
9 Sobic.K044402 - -
10 Sobic.009G026850 - -
11 Sobic.004G049600 formin, putative, expressed -
12 Sobic.009G227650 - -
13 Sobic.004G317401 - -
14 Sobic.010G212900 expressed protein -
15 Sobic.003G422100 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
16 Sobic.003G429101 - -
17 Sobic.003G005400 pectinesterase, putative, expressed -
18 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
19 Sobic.001G524600 - -
20 Sobic.003G395200 AML1, putative, expressed -


Gene co-expression network
sample Sobic003G111800 Sobic003G111800 Sobic007G059400 Sobic007G059400 Sobic003G111800--Sobic007G059400 Sobic006G278950 Sobic006G278950 Sobic003G111800--Sobic006G278950 Sobic008G096500 Sobic008G096500 Sobic003G111800--Sobic008G096500 Sobic007G055400 Sobic007G055400 Sobic003G111800--Sobic007G055400 Sobic006G084100 Sobic006G084100 Sobic003G111800--Sobic006G084100 Sobic003G242600 Sobic003G242600 Sobic003G111800--Sobic003G242600 Sobic001G211000 Sobic001G211000 Sobic003G111800--Sobic001G211000 Sobic010G090800 Sobic010G090800 Sobic003G111800--Sobic010G090800 SobicK044402 SobicK044402 Sobic003G111800--SobicK044402 Sobic003G395200 Sobic003G395200 Sobic007G059400--Sobic003G395200 Sobic009G026850 Sobic009G026850 Sobic007G059400--Sobic009G026850 Sobic007G059400--Sobic003G111800 Sobic008G112550 Sobic008G112550 Sobic007G059400--Sobic008G112550 Sobic001G144900 Sobic001G144900 Sobic007G059400--Sobic001G144900 Sobic007G004900 Sobic007G004900 Sobic007G059400--Sobic007G004900 Sobic002G383500 Sobic002G383500 Sobic007G059400--Sobic002G383500 Sobic007G059400--Sobic008G096500 Sobic007G059400--Sobic006G084100 Sobic006G278950--Sobic006G084100 Sobic006G278950--Sobic001G211000 Sobic006G278950--Sobic003G242600 Sobic006G278950--Sobic010G090800 Sobic003G005400 Sobic003G005400 Sobic006G278950--Sobic003G005400 Sobic001G388100 Sobic001G388100 Sobic006G278950--Sobic001G388100 Sobic003G429101 Sobic003G429101 Sobic006G278950--Sobic003G429101 Sobic003G046900 Sobic003G046900 Sobic006G278950--Sobic003G046900 Sobic006G278950--Sobic008G096500 Sobic008G096500--Sobic006G278950 Sobic008G096500--Sobic006G084100 Sobic008G096500--Sobic010G090800 Sobic008G096500--Sobic001G211000 Sobic001G311200 Sobic001G311200 Sobic008G096500--Sobic001G311200 Sobic008G096500--Sobic003G242600 Sobic008G096500--Sobic003G005400 Sobic008G096500--Sobic007G004900 Sobic008G096500--Sobic001G388100 Sobic007G055400--SobicK044402 Sobic003G143401 Sobic003G143401 Sobic007G055400--Sobic003G143401 Sobic004G067850 Sobic004G067850 Sobic007G055400--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic007G055400--Sobic008G032850 Sobic001G001132 Sobic001G001132 Sobic007G055400--Sobic001G001132 Sobic009G227650 Sobic009G227650 Sobic007G055400--Sobic009G227650 Sobic008G085600 Sobic008G085600 Sobic007G055400--Sobic008G085600 Sobic010G262650 Sobic010G262650 Sobic007G055400--Sobic010G262650 Sobic010G158601 Sobic010G158601 Sobic007G055400--Sobic010G158601 Sobic006G084100--Sobic001G388100 Sobic006G084100--Sobic006G278950 Sobic006G084100--Sobic001G211000 Sobic001G495850 Sobic001G495850 Sobic006G084100--Sobic001G495850 Sobic006G084100--Sobic003G242600 Sobic006G084100--Sobic010G090800 Sobic006G084100--Sobic001G311200 Sobic009G150800 Sobic009G150800 Sobic006G084100--Sobic009G150800 Sobic006G084100--Sobic007G004900 Sobic003G422100 Sobic003G422100 Sobic003G242600--Sobic003G422100 Sobic003G242600--Sobic006G278950 Sobic003G242600--Sobic003G429101 Sobic003G242600--Sobic006G084100 Sobic003G242600--Sobic003G046900 Sobic003G242600--Sobic010G090800 Sobic010G212900 Sobic010G212900 Sobic003G242600--Sobic010G212900 Sobic003G242600--Sobic001G211000 Sobic003G242600--Sobic001G388100 Sobic001G211000--Sobic006G084100 Sobic001G211000--Sobic006G278950 Sobic001G211000--Sobic003G242600 Sobic001G211000--Sobic010G090800 Sobic001G211000--Sobic001G388100 Sobic001G211000--Sobic003G005400 Sobic001G211000--Sobic003G429101 Sobic001G211000--Sobic003G046900 Sobic001G211000--Sobic001G311200 Sobic010G090800--Sobic006G278950 Sobic010G090800--Sobic003G242600 Sobic010G090800--Sobic003G005400 Sobic010G090800--Sobic006G084100 Sobic010G090800--Sobic001G211000 Sobic010G090800--Sobic003G429101 Sobic010G090800--Sobic009G150800 Sobic010G090800--Sobic001G388100 Sobic010G090800--Sobic003G046900 SobicK044402--Sobic007G055400 SobicK044402--Sobic009G227650 Sobic005G227900 Sobic005G227900 SobicK044402--Sobic005G227900 SobicK044402--Sobic010G158601 SobicK044402--Sobic008G085600 Sobic002G185400 Sobic002G185400 SobicK044402--Sobic002G185400 Sobic003G363600 Sobic003G363600 SobicK044402--Sobic003G363600 SobicK044402--Sobic010G262650 SobicK044402--Sobic004G067850
Octagon: transcription factors


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