Gene annotation
Transcriptome id Sobic.008G096500.1
Synonym Sb08g014550
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt A0A1B6PCH8
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50150 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os12g29650.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015717 , Zm00025a046576
Brachypodium KQJ88313 , PNT63518 , PNT63517 , PNT63516 , KQJ86728
Barley HORVU6Hr1G061190.3 , HORVU6Hr1G061190.2 , HORVU6Hr1G061190.1 , HORVU6Hr1G061190.5 , HORVU6Hr1G061190.4
Wheat TraesCS3A02G428500 , TraesCS6D02G221900 , TraesCS6A02G239500 , TraesCS6A02G239500 , TraesCS6A02G239500 , TraesCS4A02G207400 , TraesCS6D02G221900 , TraesCS6B02G285000 , TraesCS6B02G285000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G278950 - -
2 Sobic.006G084100 expressed protein -
3 Sobic.010G090800 no apical meristem protein, expressed -
4 Sobic.001G211000 RIPER3 - Ripening-related family protein precursor, putative, expressed -
5 Sobic.001G311200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
6 Sobic.003G242600 - -
7 Sobic.003G005400 pectinesterase, putative, expressed -
8 Sobic.007G004900 expressed protein -
9 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
10 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
11 Sobic.003G429101 - -
12 Sobic.002G243100 expressed protein -
13 Sobic.001G495850 - -
14 Sobic.002G383500 expressed protein -
15 Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed -
16 Sobic.001G144900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@cupin domain containing protein, expressed -
17 Sobic.003G046900 expressed protein -
18 Sobic.004G196900 - -
19 Sobic.002G231100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZF-HD protein dimerisation region containing protein, expressed -
20 Sobic.003G051900 - -


Gene co-expression network
sample Sobic008G096500 Sobic008G096500 Sobic006G278950 Sobic006G278950 Sobic008G096500--Sobic006G278950 Sobic006G084100 Sobic006G084100 Sobic008G096500--Sobic006G084100 Sobic010G090800 Sobic010G090800 Sobic008G096500--Sobic010G090800 Sobic001G211000 Sobic001G211000 Sobic008G096500--Sobic001G211000 Sobic001G311200 Sobic001G311200 Sobic008G096500--Sobic001G311200 Sobic003G242600 Sobic003G242600 Sobic008G096500--Sobic003G242600 Sobic003G005400 Sobic003G005400 Sobic008G096500--Sobic003G005400 Sobic007G004900 Sobic007G004900 Sobic008G096500--Sobic007G004900 Sobic001G388100 Sobic001G388100 Sobic008G096500--Sobic001G388100 Sobic006G278950--Sobic006G084100 Sobic006G278950--Sobic001G211000 Sobic006G278950--Sobic003G242600 Sobic006G278950--Sobic010G090800 Sobic006G278950--Sobic003G005400 Sobic006G278950--Sobic001G388100 Sobic003G429101 Sobic003G429101 Sobic006G278950--Sobic003G429101 Sobic003G046900 Sobic003G046900 Sobic006G278950--Sobic003G046900 Sobic006G278950--Sobic008G096500 Sobic006G084100--Sobic001G388100 Sobic006G084100--Sobic006G278950 Sobic006G084100--Sobic001G211000 Sobic001G495850 Sobic001G495850 Sobic006G084100--Sobic001G495850 Sobic006G084100--Sobic003G242600 Sobic006G084100--Sobic010G090800 Sobic006G084100--Sobic001G311200 Sobic009G150800 Sobic009G150800 Sobic006G084100--Sobic009G150800 Sobic006G084100--Sobic007G004900 Sobic010G090800--Sobic006G278950 Sobic010G090800--Sobic003G242600 Sobic010G090800--Sobic003G005400 Sobic010G090800--Sobic006G084100 Sobic010G090800--Sobic001G211000 Sobic010G090800--Sobic003G429101 Sobic010G090800--Sobic009G150800 Sobic010G090800--Sobic001G388100 Sobic010G090800--Sobic003G046900 Sobic001G211000--Sobic006G084100 Sobic001G211000--Sobic006G278950 Sobic001G211000--Sobic003G242600 Sobic001G211000--Sobic010G090800 Sobic001G211000--Sobic001G388100 Sobic001G211000--Sobic003G005400 Sobic001G211000--Sobic003G429101 Sobic001G211000--Sobic003G046900 Sobic001G211000--Sobic001G311200 Sobic001G311200--Sobic007G004900 Sobic004G111500 Sobic004G111500 Sobic001G311200--Sobic004G111500 Sobic001G091000 Sobic001G091000 Sobic001G311200--Sobic001G091000 Sobic001G311200--Sobic006G084100 Sobic001G144900 Sobic001G144900 Sobic001G311200--Sobic001G144900 Sobic004G195900 Sobic004G195900 Sobic001G311200--Sobic004G195900 Sobic004G092700 Sobic004G092700 Sobic001G311200--Sobic004G092700 Sobic002G243100 Sobic002G243100 Sobic001G311200--Sobic002G243100 Sobic001G311200--Sobic006G278950 Sobic003G422100 Sobic003G422100 Sobic003G242600--Sobic003G422100 Sobic003G242600--Sobic006G278950 Sobic003G242600--Sobic003G429101 Sobic003G242600--Sobic006G084100 Sobic003G242600--Sobic003G046900 Sobic003G242600--Sobic010G090800 Sobic010G212900 Sobic010G212900 Sobic003G242600--Sobic010G212900 Sobic003G242600--Sobic001G211000 Sobic003G242600--Sobic001G388100 Sobic003G005400--Sobic010G090800 Sobic003G005400--Sobic006G278950 Sobic003G005400--Sobic003G429101 Sobic003G005400--Sobic006G084100 Sobic003G005400--Sobic003G242600 Sobic003G005400--Sobic001G211000 Sobic003G005400--Sobic003G046900 Sobic003G005400--Sobic001G388100 Sobic003G005400--Sobic009G150800 Sobic007G004900--Sobic001G311200 Sobic007G004900--Sobic004G111500 Sobic002G383500 Sobic002G383500 Sobic007G004900--Sobic002G383500 Sobic007G004900--Sobic001G091000 Sobic007G004900--Sobic006G084100 Sobic007G004900--Sobic001G144900 Sobic007G004900--Sobic004G092700 Sobic007G004900--Sobic002G243100 Sobic002G231100 Sobic002G231100 Sobic007G004900--Sobic002G231100 Sobic001G388100--Sobic001G495850 Sobic001G388100--Sobic009G150800 Sobic003G241400 Sobic003G241400 Sobic001G388100--Sobic003G241400 Sobic001G388100--Sobic006G084100 Sobic006G261000 Sobic006G261000 Sobic001G388100--Sobic006G261000 Sobic009G214700 Sobic009G214700 Sobic001G388100--Sobic009G214700 Sobic007G075200 Sobic007G075200 Sobic001G388100--Sobic007G075200 Sobic006G196700 Sobic006G196700 Sobic001G388100--Sobic006G196700 Sobic001G388100--Sobic003G046900
Octagon: transcription factors


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