Gene annotation
Transcriptome id Sobic.002G231100.1
Synonym HB22, ATHB22, MEE68, Sb02g027040
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
ZF-HD protein dimerisation region containing protein, expressed
UniProt C5X2Z8
Pfam PF04770
Panther DB PTHR31948 PTHR31948:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24660 : homeobox protein 22
RAP-DB (Rice) LOC_Os09g29130.1 : ZF-HD protein dimerisation region containing protein, expressed
MaizeGDB (Corn) Zm00025a013920 , Zm00025a014112 , Zm00025a032466 , Zm00025a021731 , Zm00025a029545 , Zm00025a025639 , Zm00025a047321 , Zm00025a005471 , Zm00025a031185
Brachypodium KQJ88784 , KQJ98684 , KQJ90576 , KQK08889 , KQK00949
Barley HORVU6Hr1G069090.2 , HORVU6Hr1G069090.1 , HORVU5Hr1G069730.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G102050 - -
2 Sobic.002G138000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
3 Sobic.001G144900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@cupin domain containing protein, expressed -
4 Sobic.006G084100 expressed protein -
5 Sobic.002G383500 expressed protein -
6 Sobic.007G004900 expressed protein -
7 Sobic.001G311200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
8 Sobic.001G091000 late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
10 Sobic.006G278950 - -
11 Sobic.001G211000 RIPER3 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.001G495850 - -
13 Sobic.006G210500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, group 3, putative, expressed -
14 Sobic.001G497700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
15 Sobic.003G270200 dehydrin family protein, expressed -
16 Sobic.009G104600 small hydrophilic plant seed protein, putative, expressed -
17 Sobic.004G111500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant domain-containing protein, putative, expressed -
18 Sobic.007G197500 expressed protein -
19 Sobic.008G112550 - -
20 Sobic.002G185100 succinate dehydrogenase and fumarate reductase iron-sulfur protein, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit


Gene co-expression network
sample Sobic002G231100 Sobic002G231100 Sobic008G102050 Sobic008G102050 Sobic002G231100--Sobic008G102050 Sobic002G138000 Sobic002G138000 Sobic002G231100--Sobic002G138000 Sobic001G144900 Sobic001G144900 Sobic002G231100--Sobic001G144900 Sobic006G084100 Sobic006G084100 Sobic002G231100--Sobic006G084100 Sobic002G383500 Sobic002G383500 Sobic002G231100--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G231100--Sobic007G004900 Sobic001G311200 Sobic001G311200 Sobic002G231100--Sobic001G311200 Sobic001G091000 Sobic001G091000 Sobic002G231100--Sobic001G091000 Sobic001G388100 Sobic001G388100 Sobic002G231100--Sobic001G388100 Sobic001G495850 Sobic001G495850 Sobic008G102050--Sobic001G495850 Sobic008G102050--Sobic001G388100 Sobic008G102050--Sobic002G231100 Sobic008G102050--Sobic006G084100 Sobic009G150800 Sobic009G150800 Sobic008G102050--Sobic009G150800 Sobic002G240300 Sobic002G240300 Sobic008G102050--Sobic002G240300 Sobic008G102050--Sobic002G138000 Sobic002G416300 Sobic002G416300 Sobic008G102050--Sobic002G416300 Sobic003G241400 Sobic003G241400 Sobic008G102050--Sobic003G241400 Sobic002G138000--Sobic002G383500 Sobic002G138000--Sobic002G231100 Sobic002G138000--Sobic001G144900 Sobic002G138000--Sobic008G102050 Sobic002G138000--Sobic006G084100 Sobic007G197500 Sobic007G197500 Sobic002G138000--Sobic007G197500 Sobic002G138000--Sobic007G004900 Sobic002G356300 Sobic002G356300 Sobic002G138000--Sobic002G356300 Sobic008G112550 Sobic008G112550 Sobic002G138000--Sobic008G112550 Sobic001G497700 Sobic001G497700 Sobic001G144900--Sobic001G497700 Sobic009G104600 Sobic009G104600 Sobic001G144900--Sobic009G104600 Sobic005G167650 Sobic005G167650 Sobic001G144900--Sobic005G167650 Sobic010G007800 Sobic010G007800 Sobic001G144900--Sobic010G007800 Sobic002G185100 Sobic002G185100 Sobic001G144900--Sobic002G185100 Sobic009G104500 Sobic009G104500 Sobic001G144900--Sobic009G104500 Sobic001G144900--Sobic002G383500 Sobic004G091600 Sobic004G091600 Sobic001G144900--Sobic004G091600 Sobic001G144900--Sobic007G004900 Sobic006G084100--Sobic001G388100 Sobic006G278950 Sobic006G278950 Sobic006G084100--Sobic006G278950 Sobic001G211000 Sobic001G211000 Sobic006G084100--Sobic001G211000 Sobic006G084100--Sobic001G495850 Sobic003G242600 Sobic003G242600 Sobic006G084100--Sobic003G242600 Sobic010G090800 Sobic010G090800 Sobic006G084100--Sobic010G090800 Sobic006G084100--Sobic001G311200 Sobic006G084100--Sobic009G150800 Sobic006G084100--Sobic007G004900 Sobic002G383500--Sobic007G004900 Sobic002G143300 Sobic002G143300 Sobic002G383500--Sobic002G143300 Sobic002G383500--Sobic001G144900 Sobic002G383500--Sobic006G084100 Sobic002G383500--Sobic002G138000 Sobic002G383500--Sobic002G231100 Sobic009G026850 Sobic009G026850 Sobic002G383500--Sobic009G026850 Sobic002G383500--Sobic001G497700 Sobic002G383500--Sobic001G311200 Sobic007G004900--Sobic001G311200 Sobic004G111500 Sobic004G111500 Sobic007G004900--Sobic004G111500 Sobic007G004900--Sobic002G383500 Sobic007G004900--Sobic001G091000 Sobic007G004900--Sobic006G084100 Sobic007G004900--Sobic001G144900 Sobic004G092700 Sobic004G092700 Sobic007G004900--Sobic004G092700 Sobic002G243100 Sobic002G243100 Sobic007G004900--Sobic002G243100 Sobic007G004900--Sobic002G231100 Sobic001G311200--Sobic007G004900 Sobic001G311200--Sobic004G111500 Sobic001G311200--Sobic001G091000 Sobic001G311200--Sobic006G084100 Sobic001G311200--Sobic001G144900 Sobic004G195900 Sobic004G195900 Sobic001G311200--Sobic004G195900 Sobic001G311200--Sobic004G092700 Sobic001G311200--Sobic002G243100 Sobic001G311200--Sobic006G278950 Sobic001G091000--Sobic004G111500 Sobic001G091000--Sobic001G311200 Sobic001G091000--Sobic007G004900 Sobic001G091000--Sobic004G195900 Sobic001G241000 Sobic001G241000 Sobic001G091000--Sobic001G241000 Sobic001G091000--Sobic004G092700 Sobic001G091000--Sobic002G243100 Sobic001G091000--Sobic006G084100 Sobic004G196900 Sobic004G196900 Sobic001G091000--Sobic004G196900 Sobic001G388100--Sobic001G495850 Sobic001G388100--Sobic009G150800 Sobic001G388100--Sobic003G241400 Sobic001G388100--Sobic006G084100 Sobic006G261000 Sobic006G261000 Sobic001G388100--Sobic006G261000 Sobic009G214700 Sobic009G214700 Sobic001G388100--Sobic009G214700 Sobic007G075200 Sobic007G075200 Sobic001G388100--Sobic007G075200 Sobic006G196700 Sobic006G196700 Sobic001G388100--Sobic006G196700 Sobic003G046900 Sobic003G046900 Sobic001G388100--Sobic003G046900
Octagon: transcription factors


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