Gene annotation
Transcriptome id Sobic.003G116500.1
Synonym Sb03g009810
Functional annotation decarboxylase, putative, expressed
UniProt C5XFU7
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF88
NCBI CDD KOG0628; Aromatic-L-amino-acid/L-histidine decarboxylase
KEGG Orthology K01592; tyrosine decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT2G20340 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os10g26110.1 : decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a007026
Brachypodium -
Barley HORVU3Hr1G088940.1 , HORVU3Hr1G088880.1 , HORVU3Hr1G088880.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G145600 expressed protein -
2 Sobic.002G379201 - -
3 Sobic.010G156200 - -
4 Sobic.001G237400 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.007G067608 - -
6 Sobic.002G315900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
7 Sobic.004G140850 - -
8 Sobic.004G140850 - -
9 Sobic.004G140850 - -
10 Sobic.007G066500 Cupin domain containing protein, expressed -
11 Sobic.003G278100 expressed protein -
12 Sobic.004G013200 glutamate receptor, putative, expressed -
13 Sobic.007G066900 Cupin domain containing protein, expressed -
14 Sobic.003G293500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
15 Sobic.004G210700 ATOZI1, putative, expressed -
16 Sobic.007G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.007G066600 Cupin domain containing protein, expressed -
18 Sobic.004G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
19 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
20 Sobic.010G075500 expressed protein -


Gene co-expression network
sample Sobic003G116500 Sobic003G116500 Sobic003G145600 Sobic003G145600 Sobic003G116500--Sobic003G145600 Sobic002G379201 Sobic002G379201 Sobic003G116500--Sobic002G379201 Sobic010G156200 Sobic010G156200 Sobic003G116500--Sobic010G156200 Sobic001G237400 Sobic001G237400 Sobic003G116500--Sobic001G237400 Sobic007G067608 Sobic007G067608 Sobic003G116500--Sobic007G067608 Sobic002G315900 Sobic002G315900 Sobic003G116500--Sobic002G315900 Sobic004G140850 Sobic004G140850 Sobic003G116500--Sobic004G140850 Sobic004G013200 Sobic004G013200 Sobic003G145600--Sobic004G013200 Sobic003G145600--Sobic003G116500 Sobic003G278100 Sobic003G278100 Sobic003G145600--Sobic003G278100 Sobic003G281100 Sobic003G281100 Sobic003G145600--Sobic003G281100 Sobic003G098300 Sobic003G098300 Sobic003G145600--Sobic003G098300 Sobic008G170500 Sobic008G170500 Sobic003G145600--Sobic008G170500 Sobic006G245500 Sobic006G245500 Sobic003G145600--Sobic006G245500 Sobic001G205800 Sobic001G205800 Sobic003G145600--Sobic001G205800 Sobic010G221800 Sobic010G221800 Sobic003G145600--Sobic010G221800 Sobic002G379201--Sobic001G237400 Sobic002G379201--Sobic004G140850 Sobic002G379201--Sobic007G067608 Sobic007G066900 Sobic007G066900 Sobic002G379201--Sobic007G066900 Sobic004G340200 Sobic004G340200 Sobic002G379201--Sobic004G340200 Sobic002G379201--Sobic002G315900 Sobic004G210700 Sobic004G210700 Sobic002G379201--Sobic004G210700 Sobic005G098900 Sobic005G098900 Sobic010G156200--Sobic005G098900 Sobic001G507000 Sobic001G507000 Sobic010G156200--Sobic001G507000 Sobic002G101100 Sobic002G101100 Sobic010G156200--Sobic002G101100 Sobic010G165900 Sobic010G165900 Sobic010G156200--Sobic010G165900 Sobic008G090100 Sobic008G090100 Sobic010G156200--Sobic008G090100 Sobic007G139500 Sobic007G139500 Sobic010G156200--Sobic007G139500 Sobic002G351700 Sobic002G351700 Sobic010G156200--Sobic002G351700 Sobic004G321400 Sobic004G321400 Sobic010G156200--Sobic004G321400 Sobic004G095200 Sobic004G095200 Sobic010G156200--Sobic004G095200 Sobic001G237400--Sobic007G067608 Sobic001G237400--Sobic002G379201 Sobic007G066500 Sobic007G066500 Sobic001G237400--Sobic007G066500 Sobic007G066800 Sobic007G066800 Sobic001G237400--Sobic007G066800 Sobic001G237400--Sobic007G066900 Sobic007G066600 Sobic007G066600 Sobic001G237400--Sobic007G066600 Sobic001G237400--Sobic004G210700 Sobic001G237400--Sobic004G140850 Sobic007G067608--Sobic007G066500 Sobic007G067608--Sobic001G237400 Sobic007G067608--Sobic007G066900 Sobic007G067608--Sobic007G066600 Sobic007G067608--Sobic004G140850 Sobic007G067608--Sobic004G210700 Sobic007G067608--Sobic007G066800 Sobic002G315900--Sobic004G140850 Sobic002G315900--Sobic002G379201 Sobic002G315900--Sobic004G340200 Sobic002G315900--Sobic007G066900 Sobic002G315900--Sobic007G067608 Sobic002G315900--Sobic004G210700 Sobic010G032000 Sobic010G032000 Sobic002G315900--Sobic010G032000 Sobic004G140850--Sobic004G140850 Sobic004G140850--Sobic007G066900 Sobic004G140850--Sobic002G379201 Sobic004G140850--Sobic004G340200 Sobic004G140850--Sobic002G315900 Sobic004G140850--Sobic007G067608 Sobic004G140850--Sobic004G210700 Sobic008G149900 Sobic008G149900 Sobic004G140850--Sobic008G149900
Octagon: transcription factors


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