Gene annotation
Transcriptome id Sobic.003G145600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q361
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g20100.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G013200 glutamate receptor, putative, expressed -
2 Sobic.003G116500 decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.003G278100 expressed protein -
4 Sobic.003G281100 B3 DNA binding domain containing protein, expressed -
5 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
6 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
9 Sobic.010G221800 Phosphoglycerate kinase(PubMedID : 26186930)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
10 Sobic.003G419500 xylanase inhibitor, putative, expressed -
11 Sobic.009G230000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transcription factor HBP-1b, putative, expressed -
12 Sobic.001G385900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@stress responsive protein, putative, expressed -
13 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
14 Sobic.010G155100 NAC domain containing protein, putative, expressed -
15 Sobic.004G138600 - -
16 Sobic.008G034300 expressed protein -
17 Sobic.004G114600 expressed protein -
18 Sobic.004G139100 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
19 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
20 Sobic.002G119200 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic003G145600 Sobic003G145600 Sobic004G013200 Sobic004G013200 Sobic003G145600--Sobic004G013200 Sobic003G116500 Sobic003G116500 Sobic003G145600--Sobic003G116500 Sobic003G278100 Sobic003G278100 Sobic003G145600--Sobic003G278100 Sobic003G281100 Sobic003G281100 Sobic003G145600--Sobic003G281100 Sobic003G098300 Sobic003G098300 Sobic003G145600--Sobic003G098300 Sobic008G170500 Sobic008G170500 Sobic003G145600--Sobic008G170500 Sobic006G245500 Sobic006G245500 Sobic003G145600--Sobic006G245500 Sobic001G205800 Sobic001G205800 Sobic003G145600--Sobic001G205800 Sobic010G221800 Sobic010G221800 Sobic003G145600--Sobic010G221800 Sobic001G436800 Sobic001G436800 Sobic004G013200--Sobic001G436800 Sobic001G129700 Sobic001G129700 Sobic004G013200--Sobic001G129700 Sobic004G210700 Sobic004G210700 Sobic004G013200--Sobic004G210700 Sobic005G215601 Sobic005G215601 Sobic004G013200--Sobic005G215601 Sobic009G123400 Sobic009G123400 Sobic004G013200--Sobic009G123400 Sobic004G013200--Sobic003G278100 Sobic010G031100 Sobic010G031100 Sobic004G013200--Sobic010G031100 Sobic002G104200 Sobic002G104200 Sobic004G013200--Sobic002G104200 Sobic010G032000 Sobic010G032000 Sobic004G013200--Sobic010G032000 Sobic003G116500--Sobic003G145600 Sobic002G379201 Sobic002G379201 Sobic003G116500--Sobic002G379201 Sobic010G156200 Sobic010G156200 Sobic003G116500--Sobic010G156200 Sobic001G237400 Sobic001G237400 Sobic003G116500--Sobic001G237400 Sobic007G067608 Sobic007G067608 Sobic003G116500--Sobic007G067608 Sobic002G315900 Sobic002G315900 Sobic003G116500--Sobic002G315900 Sobic004G140850 Sobic004G140850 Sobic003G116500--Sobic004G140850 Sobic003G278100--Sobic004G013200 Sobic007G073500 Sobic007G073500 Sobic003G278100--Sobic007G073500 Sobic003G278100--Sobic003G145600 Sobic003G278100--Sobic004G140850 Sobic003G278100--Sobic009G123400 Sobic003G278100--Sobic004G210700 Sobic004G340200 Sobic004G340200 Sobic003G278100--Sobic004G340200 Sobic004G029900 Sobic004G029900 Sobic003G281100--Sobic004G029900 Sobic009G208600 Sobic009G208600 Sobic003G281100--Sobic009G208600 Sobic005G105600 Sobic005G105600 Sobic003G281100--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic003G281100--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic003G281100--Sobic002G232900 Sobic003G419500 Sobic003G419500 Sobic003G281100--Sobic003G419500 Sobic002G240000 Sobic002G240000 Sobic003G281100--Sobic002G240000 Sobic005G021000 Sobic005G021000 Sobic003G281100--Sobic005G021000 Sobic002G119200 Sobic002G119200 Sobic003G281100--Sobic002G119200 Sobic004G347500 Sobic004G347500 Sobic003G098300--Sobic004G347500 Sobic003G098300--Sobic005G021000 Sobic006G208000 Sobic006G208000 Sobic003G098300--Sobic006G208000 Sobic001G336200 Sobic001G336200 Sobic003G098300--Sobic001G336200 Sobic003G098300--Sobic003G419500 Sobic003G098300--Sobic002G232900 Sobic001G508200 Sobic001G508200 Sobic003G098300--Sobic001G508200 Sobic009G025500 Sobic009G025500 Sobic003G098300--Sobic009G025500 Sobic003G098300--Sobic002G240000 Sobic003G300900 Sobic003G300900 Sobic008G170500--Sobic003G300900 Sobic008G170500--Sobic006G245500 Sobic008G135500 Sobic008G135500 Sobic008G170500--Sobic008G135500 Sobic008G170500--Sobic001G205800 Sobic010G090100 Sobic010G090100 Sobic008G170500--Sobic010G090100 Sobic001G197800 Sobic001G197800 Sobic008G170500--Sobic001G197800 Sobic003G128700 Sobic003G128700 Sobic008G170500--Sobic003G128700 Sobic001G385900 Sobic001G385900 Sobic008G170500--Sobic001G385900 Sobic003G019400 Sobic003G019400 Sobic008G170500--Sobic003G019400 Sobic006G245500--Sobic008G170500 Sobic006G245500--Sobic003G128700 Sobic006G245500--Sobic003G300900 Sobic008G034300 Sobic008G034300 Sobic006G245500--Sobic008G034300 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic001G397100 Sobic001G397100 Sobic006G245500--Sobic001G397100 Sobic006G245500--Sobic008G135500 Sobic006G245500--Sobic001G197800 Sobic001G205800--Sobic008G170500 Sobic001G205800--Sobic001G385900 Sobic001G205800--Sobic008G034300 Sobic001G205800--Sobic006G245500 Sobic001G205800--Sobic010G221800 Sobic010G164400 Sobic010G164400 Sobic001G205800--Sobic010G164400 Sobic001G205800--Sobic003G128700 Sobic003G386800 Sobic003G386800 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic010G221800--Sobic001G205800 Sobic010G221800--Sobic001G385900 Sobic010G221800--Sobic008G034300 Sobic010G221800--Sobic008G170500 Sobic010G221800--Sobic010G164400 Sobic009G111400 Sobic009G111400 Sobic010G221800--Sobic009G111400 Sobic010G221800--Sobic006G245500 Sobic002G389100 Sobic002G389100 Sobic010G221800--Sobic002G389100 Sobic002G231000 Sobic002G231000 Sobic010G221800--Sobic002G231000
Octagon: transcription factors


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