Gene annotation
Transcriptome id Sobic.003G118266.1
Synonym -
Functional annotation -
UniProt A0A1W0VWU9
Pfam PF00195 PF02797
Panther DB PTHR11877:SF29 PTHR11877
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os10g07616.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G082800 - -
2 Sobic.006G227600 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
3 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
4 Sobic.009G085700 - -
5 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.005G191500 ATBPM2, putative, expressed -
7 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
8 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
9 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
10 Sobic.010G179500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.001G145050 - -
12 Sobic.005G063900 expressed protein -
13 Sobic.004G343400 diphthamide biosynthesis protein, putative, expressed K07561: DPH1, 2-(3-amino-3-carboxypropyl)histidine synthase
14 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
15 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
16 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
17 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
19 Sobic.001G448800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lecithin cholesterol acyltransferase, putative, expressed -
20 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase


Gene co-expression network
sample Sobic003G118266 Sobic003G118266 Sobic009G082800 Sobic009G082800 Sobic003G118266--Sobic009G082800 Sobic006G227600 Sobic006G227600 Sobic003G118266--Sobic006G227600 Sobic004G078600 Sobic004G078600 Sobic003G118266--Sobic004G078600 Sobic009G085700 Sobic009G085700 Sobic003G118266--Sobic009G085700 Sobic002G041800 Sobic002G041800 Sobic003G118266--Sobic002G041800 Sobic005G191500 Sobic005G191500 Sobic003G118266--Sobic005G191500 Sobic001G198700 Sobic001G198700 Sobic003G118266--Sobic001G198700 Sobic009G075100 Sobic009G075100 Sobic003G118266--Sobic009G075100 Sobic001G019300 Sobic001G019300 Sobic003G118266--Sobic001G019300 Sobic002G064200 Sobic002G064200 Sobic009G082800--Sobic002G064200 Sobic004G303500 Sobic004G303500 Sobic009G082800--Sobic004G303500 Sobic010G172300 Sobic010G172300 Sobic009G082800--Sobic010G172300 Sobic009G115300 Sobic009G115300 Sobic009G082800--Sobic009G115300 Sobic010G225500 Sobic010G225500 Sobic009G082800--Sobic010G225500 Sobic010G046900 Sobic010G046900 Sobic009G082800--Sobic010G046900 Sobic002G202700 Sobic002G202700 Sobic009G082800--Sobic002G202700 Sobic008G095100 Sobic008G095100 Sobic009G082800--Sobic008G095100 Sobic002G173900 Sobic002G173900 Sobic009G082800--Sobic002G173900 Sobic006G227600--Sobic003G118266 Sobic002G395200 Sobic002G395200 Sobic006G227600--Sobic002G395200 Sobic002G209200 Sobic002G209200 Sobic006G227600--Sobic002G209200 Sobic005G220900 Sobic005G220900 Sobic006G227600--Sobic005G220900 Sobic006G227600--Sobic005G191500 Sobic006G227600--Sobic001G019300 Sobic005G063900 Sobic005G063900 Sobic006G227600--Sobic005G063900 Sobic005G190900 Sobic005G190900 Sobic006G227600--Sobic005G190900 Sobic001G299400 Sobic001G299400 Sobic006G227600--Sobic001G299400 Sobic001G201800 Sobic001G201800 Sobic004G078600--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic004G078600--Sobic002G423600 Sobic009G115400 Sobic009G115400 Sobic004G078600--Sobic009G115400 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic001G012000 Sobic001G012000 Sobic004G078600--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600 Sobic009G085700--Sobic002G041800 Sobic009G085700--Sobic002G423600 Sobic005G085500 Sobic005G085500 Sobic009G085700--Sobic005G085500 Sobic001G145050 Sobic001G145050 Sobic009G085700--Sobic001G145050 Sobic009G085700--Sobic009G252100 Sobic009G085700--Sobic004G078600 Sobic002G265400 Sobic002G265400 Sobic009G085700--Sobic002G265400 Sobic009G037200 Sobic009G037200 Sobic009G085700--Sobic009G037200 Sobic009G085700--Sobic005G063900 Sobic002G041800--Sobic005G085500 Sobic002G041800--Sobic004G078600 Sobic002G041800--Sobic002G423600 Sobic004G195800 Sobic004G195800 Sobic002G041800--Sobic004G195800 Sobic002G041800--Sobic009G252100 Sobic004G217700 Sobic004G217700 Sobic002G041800--Sobic004G217700 Sobic002G209100 Sobic002G209100 Sobic002G041800--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic002G041800--Sobic006G060800 Sobic002G041800--Sobic001G201800 Sobic003G106500 Sobic003G106500 Sobic005G191500--Sobic003G106500 Sobic008G073400 Sobic008G073400 Sobic005G191500--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic005G191500--Sobic001G520100 Sobic005G191500--Sobic001G019300 Sobic001G161100 Sobic001G161100 Sobic005G191500--Sobic001G161100 Sobic007G178500 Sobic007G178500 Sobic005G191500--Sobic007G178500 Sobic003G015500 Sobic003G015500 Sobic005G191500--Sobic003G015500 Sobic010G179500 Sobic010G179500 Sobic005G191500--Sobic010G179500 Sobic001G260850 Sobic001G260850 Sobic005G191500--Sobic001G260850 Sobic001G198700--Sobic003G106500 Sobic001G198700--Sobic001G019300 Sobic001G198700--Sobic002G265400 Sobic002G195700 Sobic002G195700 Sobic001G198700--Sobic002G195700 Sobic008G063100 Sobic008G063100 Sobic001G198700--Sobic008G063100 Sobic004G063200 Sobic004G063200 Sobic001G198700--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G198700--Sobic005G093300 Sobic002G371900 Sobic002G371900 Sobic001G198700--Sobic002G371900 Sobic001G198700--Sobic004G078600 Sobic009G075100--Sobic004G078600 Sobic009G233900 Sobic009G233900 Sobic009G075100--Sobic009G233900 Sobic009G075100--Sobic001G201800 Sobic009G075100--Sobic009G115400 Sobic004G007500 Sobic004G007500 Sobic009G075100--Sobic004G007500 Sobic003G214000 Sobic003G214000 Sobic009G075100--Sobic003G214000 Sobic009G075100--Sobic002G423600 Sobic001G448800 Sobic001G448800 Sobic009G075100--Sobic001G448800 Sobic009G000900 Sobic009G000900 Sobic009G075100--Sobic009G000900 Sobic001G019300--Sobic002G265400 Sobic002G281000 Sobic002G281000 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700
Octagon: transcription factors


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