Gene annotation
Transcriptome id Sobic.003G167700.1
Synonym
Functional annotation -
UniProt A0A1B6Q3P1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G167700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G201400 ZF-HD protein dimerisation region containing protein, expressed -
2 Sobic.010G172200 cytochrome P450, putative, expressed -
3 Sobic.006G273000 AT hook motif domain containing protein, expressed -
4 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
5 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
6 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
8 Sobic.005G076000 expressed protein -
9 Sobic.007G014600 transferase family protein, putative, expressed -
10 Sobic.005G055900 expressed protein -
11 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
12 Sobic.007G179750 - -
13 Sobic.006G053700 ACT domain containing protein, expressed -
14 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
15 Sobic.007G191900 ACT domain containing protein, expressed -
16 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
17 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
19 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
20 Sobic.001G093600 - -


Gene co-expression network
sample Sobic003G167700 Sobic003G167700 Sobic002G201400 Sobic002G201400 Sobic003G167700--Sobic002G201400 Sobic010G172200 Sobic010G172200 Sobic003G167700--Sobic010G172200 Sobic006G273000 Sobic006G273000 Sobic003G167700--Sobic006G273000 Sobic010G052500 Sobic010G052500 Sobic003G167700--Sobic010G052500 Sobic004G096300 Sobic004G096300 Sobic003G167700--Sobic004G096300 Sobic001G275200 Sobic001G275200 Sobic003G167700--Sobic001G275200 Sobic001G005500 Sobic001G005500 Sobic003G167700--Sobic001G005500 Sobic005G076000 Sobic005G076000 Sobic003G167700--Sobic005G076000 Sobic007G014600 Sobic007G014600 Sobic003G167700--Sobic007G014600 Sobic002G201400--Sobic001G275200 Sobic002G201400--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic002G201400--Sobic003G088800 Sobic007G179750 Sobic007G179750 Sobic002G201400--Sobic007G179750 Sobic002G201400--Sobic001G005500 Sobic001G093600 Sobic001G093600 Sobic002G201400--Sobic001G093600 Sobic002G201400--Sobic010G052500 Sobic006G269400 Sobic006G269400 Sobic002G201400--Sobic006G269400 Sobic002G195700 Sobic002G195700 Sobic002G201400--Sobic002G195700 Sobic010G172200--Sobic004G096300 Sobic003G264901 Sobic003G264901 Sobic010G172200--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic010G172200--Sobic006G053700 Sobic001G293800 Sobic001G293800 Sobic010G172200--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic010G172200--Sobic001G377000 Sobic007G071000 Sobic007G071000 Sobic010G172200--Sobic007G071000 Sobic001G225500 Sobic001G225500 Sobic010G172200--Sobic001G225500 Sobic010G172200--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic010G172200--Sobic008G152200 Sobic006G273000--Sobic001G275200 Sobic006G273000--Sobic001G093600 Sobic010G245100 Sobic010G245100 Sobic006G273000--Sobic010G245100 Sobic003G284300 Sobic003G284300 Sobic006G273000--Sobic003G284300 Sobic006G273000--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic006G273000--Sobic009G213400 Sobic010G246600 Sobic010G246600 Sobic006G273000--Sobic010G246600 Sobic006G273000--Sobic010G052500 Sobic006G273000--Sobic007G179750 Sobic003G222300 Sobic003G222300 Sobic010G052500--Sobic003G222300 Sobic003G114100 Sobic003G114100 Sobic010G052500--Sobic003G114100 Sobic010G052500--Sobic006G273000 Sobic010G052500--Sobic009G213400 Sobic010G052500--Sobic001G005500 Sobic010G052500--Sobic010G246600 Sobic010G052500--Sobic001G275200 Sobic007G191900 Sobic007G191900 Sobic010G052500--Sobic007G191900 Sobic010G052500--Sobic010G245100 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic004G096300--Sobic001G377000 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic004G096300--Sobic006G053700 Sobic001G053900 Sobic001G053900 Sobic004G096300--Sobic001G053900 Sobic004G096300--Sobic007G014600 Sobic004G096300--Sobic008G152200 Sobic001G275200--Sobic006G273000 Sobic001G275200--Sobic003G088800 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G275200--Sobic001G005500 Sobic005G203900 Sobic005G203900 Sobic001G275200--Sobic005G203900 Sobic001G019300 Sobic001G019300 Sobic001G275200--Sobic001G019300 Sobic001G435500 Sobic001G435500 Sobic001G275200--Sobic001G435500 Sobic005G055900 Sobic005G055900 Sobic001G275200--Sobic005G055900 Sobic001G321600 Sobic001G321600 Sobic001G005500--Sobic001G321600 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic001G005500--Sobic007G191900 Sobic003G178700 Sobic003G178700 Sobic005G076000--Sobic003G178700 Sobic008G105900 Sobic008G105900 Sobic005G076000--Sobic008G105900 Sobic003G167632 Sobic003G167632 Sobic005G076000--Sobic003G167632 Sobic003G167800 Sobic003G167800 Sobic005G076000--Sobic003G167800 Sobic001G269300 Sobic001G269300 Sobic005G076000--Sobic001G269300 Sobic006G180432 Sobic006G180432 Sobic005G076000--Sobic006G180432 Sobic006G060200 Sobic006G060200 Sobic005G076000--Sobic006G060200 Sobic004G315800 Sobic004G315800 Sobic005G076000--Sobic004G315800 Sobic001G217700 Sobic001G217700 Sobic005G076000--Sobic001G217700 Sobic002G271600 Sobic002G271600 Sobic007G014600--Sobic002G271600 Sobic007G014600--Sobic004G096300 Sobic007G014600--Sobic006G053700 Sobic001G030500 Sobic001G030500 Sobic007G014600--Sobic001G030500 Sobic002G209100 Sobic002G209100 Sobic007G014600--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic007G014600--Sobic009G205600 Sobic003G255100 Sobic003G255100 Sobic007G014600--Sobic003G255100 Sobic006G152500 Sobic006G152500 Sobic007G014600--Sobic006G152500 Sobic007G014600--Sobic003G284300
Octagon: transcription factors


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