Gene annotation
Transcriptome id Sobic.003G186300.1
Synonym Sb03g025140
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q4A3
Pfam PF05097
Panther DB PTHR34371 PTHR34371:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g37040.1 : retrotransposon protein, putative, Ty1-copia subclass, expressed
MaizeGDB (Corn) Zm00025a038325 , Zm00025a028799
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G243700 OsWAK55 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.003G033500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
3 Sobic.001G307200 exonuclease, putative, expressed -
4 Sobic.001G507500 T-complex protein, putative, expressed -
5 Sobic.003G078501 - -
6 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
7 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
8 Sobic.010G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
9 Sobic.003G233900 - -
10 Sobic.004G155150 - -
11 Sobic.009G155700 - -
12 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic003G186300 Sobic003G186300 Sobic006G243700 Sobic006G243700 Sobic003G186300--Sobic006G243700 Sobic003G033500 Sobic003G033500 Sobic003G186300--Sobic003G033500 Sobic001G307200 Sobic001G307200 Sobic003G186300--Sobic001G307200 Sobic001G507500 Sobic001G507500 Sobic003G186300--Sobic001G507500 Sobic003G078501 Sobic003G078501 Sobic003G186300--Sobic003G078501 Sobic009G000700 Sobic009G000700 Sobic003G186300--Sobic009G000700 Sobic008G171000 Sobic008G171000 Sobic003G186300--Sobic008G171000 Sobic010G212100 Sobic010G212100 Sobic003G186300--Sobic010G212100 Sobic003G233900 Sobic003G233900 Sobic003G186300--Sobic003G233900 Sobic006G243700--Sobic001G307200 Sobic003G397500 Sobic003G397500 Sobic006G243700--Sobic003G397500 Sobic008G031300 Sobic008G031300 Sobic006G243700--Sobic008G031300 Sobic006G243700--Sobic003G186300 Sobic010G260300 Sobic010G260300 Sobic006G243700--Sobic010G260300 Sobic005G087900 Sobic005G087900 Sobic006G243700--Sobic005G087900 Sobic002G229600 Sobic002G229600 Sobic006G243700--Sobic002G229600 Sobic003G252400 Sobic003G252400 Sobic006G243700--Sobic003G252400 Sobic001G521500 Sobic001G521500 Sobic006G243700--Sobic001G521500 Sobic003G033500--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic003G033500--Sobic004G310600 Sobic003G033500--Sobic001G507500 Sobic003G033500--Sobic003G078501 Sobic010G006700 Sobic010G006700 Sobic003G033500--Sobic010G006700 Sobic007G217300 Sobic007G217300 Sobic003G033500--Sobic007G217300 Sobic004G331300 Sobic004G331300 Sobic003G033500--Sobic004G331300 Sobic004G155150 Sobic004G155150 Sobic003G033500--Sobic004G155150 Sobic003G033500--Sobic003G233900 Sobic001G430700 Sobic001G430700 Sobic001G307200--Sobic001G430700 Sobic001G106000 Sobic001G106000 Sobic001G307200--Sobic001G106000 Sobic001G450800 Sobic001G450800 Sobic001G307200--Sobic001G450800 Sobic003G040800 Sobic003G040800 Sobic001G307200--Sobic003G040800 Sobic004G257350 Sobic004G257350 Sobic001G307200--Sobic004G257350 Sobic001G307200--Sobic010G260300 Sobic002G267800 Sobic002G267800 Sobic001G307200--Sobic002G267800 Sobic004G285100 Sobic004G285100 Sobic001G307200--Sobic004G285100 Sobic001G307200--Sobic003G233900 Sobic001G507500--Sobic003G033500 Sobic001G507500--Sobic003G233900 Sobic001G507500--Sobic009G000700 Sobic003G227600 Sobic003G227600 Sobic001G507500--Sobic003G227600 Sobic001G507500--Sobic004G257350 Sobic001G507500--Sobic004G155150 Sobic001G507500--Sobic004G310600 Sobic009G216900 Sobic009G216900 Sobic001G507500--Sobic009G216900 Sobic003G066900 Sobic003G066900 Sobic001G507500--Sobic003G066900 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic001G125100 Sobic001G125100 Sobic003G078501--Sobic001G125100 Sobic001G159850 Sobic001G159850 Sobic003G078501--Sobic001G159850 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic004G276200 Sobic004G276200 Sobic008G171000--Sobic004G276200 Sobic002G086800 Sobic002G086800 Sobic008G171000--Sobic002G086800 Sobic001G391300 Sobic001G391300 Sobic008G171000--Sobic001G391300 Sobic006G220300 Sobic006G220300 Sobic008G171000--Sobic006G220300 Sobic002G321300 Sobic002G321300 Sobic008G171000--Sobic002G321300 Sobic007G213100 Sobic007G213100 Sobic008G171000--Sobic007G213100 Sobic004G332100 Sobic004G332100 Sobic008G171000--Sobic004G332100 Sobic009G155700 Sobic009G155700 Sobic008G171000--Sobic009G155700 Sobic003G298600 Sobic003G298600 Sobic008G171000--Sobic003G298600 Sobic010G212100--Sobic004G276200 Sobic008G014200 Sobic008G014200 Sobic010G212100--Sobic008G014200 Sobic004G073400 Sobic004G073400 Sobic010G212100--Sobic004G073400 Sobic003G109832 Sobic003G109832 Sobic010G212100--Sobic003G109832 Sobic005G087800 Sobic005G087800 Sobic010G212100--Sobic005G087800 Sobic010G212100--Sobic003G078501 Sobic002G189000 Sobic002G189000 Sobic010G212100--Sobic002G189000 Sobic004G017000 Sobic004G017000 Sobic010G212100--Sobic004G017000 Sobic010G212100--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic002G182800 Sobic002G182800 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic003G233900--Sobic004G257350 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100
Octagon: transcription factors


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