Gene annotation
Transcriptome id Sobic.001G507500.1
Synonym HSP60, HSP60-3B
Functional annotation T-complex protein, putative, expressed
UniProt A0A1B6QQK5
Pfam PF00118
Panther DB PTHR11353 PTHR11353:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G23990 : heat shock protein 60
RAP-DB (Rice) LOC_Os10g32550.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ96977 , KQK23701 , KQK23702
Barley HORVU4Hr1G078820.3 , HORVU4Hr1G078820.2 , HORVU4Hr1G078820.1 , HORVU4Hr1G078820.7 , HORVU4Hr1G078820.6 , HORVU4Hr1G078820.5 , HORVU4Hr1G078820.4 , HORVU4Hr1G078820.9 , HORVU4Hr1G078820.8 , HORVU1Hr1G038680.11 , HORVU1Hr1G038680.6 , HORVU1Hr1G038680.7 , HORVU1Hr1G038680.4 , HORVU1Hr1G038680.5 , HORVU1Hr1G038680.2 , HORVU1Hr1G038680.3 , HORVU1Hr1G038680.1 , HORVU1Hr1G038680.13 , HORVU1Hr1G038680.8 , HORVU1Hr1G038680.9 , HORVU4Hr1G078820.13 , HORVU4Hr1G078820.11 , HORVU4Hr1G078820.10 , HORVU4Hr1G078820.17 , HORVU4Hr1G078820.16 , HORVU4Hr1G078820.15 , HORVU4Hr1G078820.14 , HORVU4Hr1G078820.19 , HORVU4Hr1G078820.18 , HORVU1Hr1G038680.18 , HORVU1Hr1G038680.19 , HORVU1Hr1G038680.14 , HORVU1Hr1G038680.15 , HORVU1Hr1G038680.16 , HORVU1Hr1G038680.17 , HORVU1Hr1G038680.10 , HORVU1Hr1G038680.12
Wheat TraesCS1D02G144000 , TraesCS1D02G144000 , TraesCS4A02G409100 , TraesCS1B02G162300 , TraesCS4D02G305900 , TraesCS4B02G307700 , TraesCS4B02G307700
Populus PNT46134 , PNT46133 , PNT52840


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G033500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
2 Sobic.003G233900 - -
3 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
4 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
5 Sobic.004G257350 - -
6 Sobic.004G155150 - -
7 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
8 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G066900 expressed protein -
10 Sobic.009G128300 CUE domain containing protein, expressed -
11 Sobic.003G040800 WRKY102, expressed -
12 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.002G342100 no apical meristem protein, putative, expressed -
14 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
15 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
16 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
17 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
18 Sobic.004G211301 - -
19 Sobic.003G373150 - -
20 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic001G507500 Sobic001G507500 Sobic003G033500 Sobic003G033500 Sobic001G507500--Sobic003G033500 Sobic003G233900 Sobic003G233900 Sobic001G507500--Sobic003G233900 Sobic009G000700 Sobic009G000700 Sobic001G507500--Sobic009G000700 Sobic003G227600 Sobic003G227600 Sobic001G507500--Sobic003G227600 Sobic004G257350 Sobic004G257350 Sobic001G507500--Sobic004G257350 Sobic004G155150 Sobic004G155150 Sobic001G507500--Sobic004G155150 Sobic004G310600 Sobic004G310600 Sobic001G507500--Sobic004G310600 Sobic009G216900 Sobic009G216900 Sobic001G507500--Sobic009G216900 Sobic003G066900 Sobic003G066900 Sobic001G507500--Sobic003G066900 Sobic003G033500--Sobic009G000700 Sobic003G033500--Sobic004G310600 Sobic003G033500--Sobic001G507500 Sobic003G078501 Sobic003G078501 Sobic003G033500--Sobic003G078501 Sobic010G006700 Sobic010G006700 Sobic003G033500--Sobic010G006700 Sobic007G217300 Sobic007G217300 Sobic003G033500--Sobic007G217300 Sobic004G331300 Sobic004G331300 Sobic003G033500--Sobic004G331300 Sobic003G033500--Sobic004G155150 Sobic003G033500--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic002G182800 Sobic002G182800 Sobic003G233900--Sobic002G182800 Sobic003G040800 Sobic003G040800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic003G233900--Sobic004G257350 Sobic003G233900--Sobic003G066900 Sobic004G285100 Sobic004G285100 Sobic003G233900--Sobic004G285100 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G227600--Sobic002G342100 Sobic001G509400 Sobic001G509400 Sobic003G227600--Sobic001G509400 Sobic001G075101 Sobic001G075101 Sobic003G227600--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G227600--Sobic002G331450 Sobic004G257350--Sobic003G233900 Sobic004G257350--Sobic004G310600 Sobic004G257350--Sobic009G000700 Sobic004G257350--Sobic004G155150 Sobic004G257350--Sobic003G040800 Sobic004G257350--Sobic003G227600 Sobic004G257350--Sobic009G128300 Sobic004G257350--Sobic003G066900 Sobic004G257350--Sobic003G078501 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic009G216900--Sobic004G285100 Sobic003G079800 Sobic003G079800 Sobic009G216900--Sobic003G079800 Sobic003G066900--Sobic003G233900 Sobic008G044750 Sobic008G044750 Sobic003G066900--Sobic008G044750 Sobic003G066900--Sobic009G128300 Sobic003G066900--Sobic009G000700 Sobic003G066900--Sobic004G310600 Sobic003G066900--Sobic004G285100 Sobic003G066900--Sobic001G509400 Sobic003G066900--Sobic004G155150 Sobic003G066900--Sobic004G257350
Octagon: transcription factors


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