Gene annotation
Transcriptome id Sobic.003G215350.1
Synonym -
Functional annotation -
UniProt A0A1W0VYE2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
2 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
3 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
5 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.002G154700 regulatory protein, putative, expressed -
7 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
8 Sobic.005G120900 expressed protein -
9 Sobic.006G009700 expressed protein -
10 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
11 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
12 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
13 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
14 Sobic.005G079100 dirigent, putative -
15 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
16 Sobic.005G106300 expressed protein -
17 Sobic.006G108300 expressed protein -
18 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
20 Sobic.008G138700 MLA12, putative, expressed -


Gene co-expression network
sample Sobic003G215350 Sobic003G215350 Sobic002G019100 Sobic002G019100 Sobic003G215350--Sobic002G019100 Sobic005G216500 Sobic005G216500 Sobic003G215350--Sobic005G216500 Sobic009G060700 Sobic009G060700 Sobic003G215350--Sobic009G060700 Sobic010G269000 Sobic010G269000 Sobic003G215350--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G215350--Sobic004G008600 Sobic002G154700 Sobic002G154700 Sobic003G215350--Sobic002G154700 Sobic005G134200 Sobic005G134200 Sobic003G215350--Sobic005G134200 Sobic005G120900 Sobic005G120900 Sobic003G215350--Sobic005G120900 Sobic006G009700 Sobic006G009700 Sobic003G215350--Sobic006G009700 Sobic002G019100--Sobic006G009700 Sobic005G104200 Sobic005G104200 Sobic002G019100--Sobic005G104200 Sobic002G019100--Sobic009G060700 Sobic006G108300 Sobic006G108300 Sobic002G019100--Sobic006G108300 Sobic008G138700 Sobic008G138700 Sobic002G019100--Sobic008G138700 Sobic008G084900 Sobic008G084900 Sobic002G019100--Sobic008G084900 Sobic001G506600 Sobic001G506600 Sobic002G019100--Sobic001G506600 Sobic001G506700 Sobic001G506700 Sobic002G019100--Sobic001G506700 Sobic002G029600 Sobic002G029600 Sobic002G019100--Sobic002G029600 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic005G216500--Sobic003G046700 Sobic005G216500--Sobic005G134200 Sobic005G216500--Sobic008G084900 Sobic007G220400 Sobic007G220400 Sobic005G216500--Sobic007G220400 Sobic002G115600 Sobic002G115600 Sobic005G216500--Sobic002G115600 Sobic007G094100 Sobic007G094100 Sobic005G216500--Sobic007G094100 Sobic010G115000 Sobic010G115000 Sobic005G216500--Sobic010G115000 Sobic009G060700--Sobic008G138700 Sobic010G152300 Sobic010G152300 Sobic009G060700--Sobic010G152300 Sobic005G222600 Sobic005G222600 Sobic009G060700--Sobic005G222600 Sobic003G001300 Sobic003G001300 Sobic009G060700--Sobic003G001300 Sobic010G213600 Sobic010G213600 Sobic009G060700--Sobic010G213600 Sobic009G060700--Sobic002G019100 Sobic009G060700--Sobic006G009700 Sobic003G079100 Sobic003G079100 Sobic009G060700--Sobic003G079100 Sobic009G060700--Sobic004G008600 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic005G226350 Sobic005G226350 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic010G269000--Sobic005G226400 Sobic010G241900 Sobic010G241900 Sobic010G269000--Sobic010G241900 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic004G008600--Sobic005G226350 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic002G029500 Sobic002G029500 Sobic002G154700--Sobic002G029500 Sobic002G082000 Sobic002G082000 Sobic002G154700--Sobic002G082000 Sobic009G106500 Sobic009G106500 Sobic002G154700--Sobic009G106500 Sobic008G058600 Sobic008G058600 Sobic002G154700--Sobic008G058600 Sobic002G154700--Sobic005G134200 Sobic002G289500 Sobic002G289500 Sobic002G154700--Sobic002G289500 Sobic005G106300 Sobic005G106300 Sobic002G154700--Sobic005G106300 Sobic001G342000 Sobic001G342000 Sobic002G154700--Sobic001G342000 Sobic006G047200 Sobic006G047200 Sobic002G154700--Sobic006G047200 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic002G391300 Sobic002G391300 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic010G128300 Sobic010G128300 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200 Sobic005G120900--Sobic010G269000 Sobic005G120900--Sobic004G008600 Sobic005G120900--Sobic003G046700 Sobic002G334000 Sobic002G334000 Sobic005G120900--Sobic002G334000 Sobic005G120900--Sobic005G134200 Sobic005G120900--Sobic010G191700 Sobic005G120900--Sobic002G082000 Sobic005G120900--Sobic005G226350 Sobic005G120900--Sobic010G241900 Sobic006G009700--Sobic008G138700 Sobic004G312500 Sobic004G312500 Sobic006G009700--Sobic004G312500 Sobic005G071900 Sobic005G071900 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300
Octagon: transcription factors


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