Gene annotation
| Transcriptome id |
Sobic.003G414200.1 |
| Synonym |
ATL3 |
| Functional annotation |
Zinc finger, C3HC4 type domain containing protein, expressed |
| UniProt |
A0A1B6Q811 |
| Pfam |
PF13639 |
| Panther DB |
- |
| NCBI CDD |
- |
| KEGG Orthology |
- |
| Gene Ontology |
GO:0008270; zinc ion binding
GO:0005515protein binding |
Orthologs (automatic annotation)
| TAIR |
AT5G43200 : Zinc finger, C3HC4 type (RING finger) family protein |
| RAP-DB (Rice) |
LOC_Os06g34450.1 : zinc finger, C3HC4 type domain containing protein, expressed |
| MaizeGDB (Corn) |
- |
| Brachypodium |
- |
| Barley |
- |
| Wheat |
- |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.001G504300 |
- |
- |
| 2 |
Sobic.004G215650 |
- |
- |
| 3 |
Sobic.004G140900 |
- |
- |
| 4 |
Sobic.010G123650 |
- |
- |
| 5 |
Sobic.001G087850 |
- |
- |
| 6 |
Sobic.007G163200 |
flavin monooxygenase, putative, expressed |
K11816: indole-3-pyruvate monooxygenase |
| 7 |
Sobic.006G064900 |
- |
- |
| 8 |
Sobic.001G032850 |
- |
- |
| 9 |
Sobic.004G194600 |
- |
- |
| 10 |
Sobic.001G045100 |
peroxidase precursor, putative, expressed |
K00430: peroxidase |
| 11 |
Sobic.004G207733 |
- |
- |
| 12 |
Sobic.006G065000 |
- |
- |
| 13 |
Sobic.002G118000 |
ATP synthase, putative, expressed |
- |
| 14 |
Sobic.001G045900 |
polygalacturonase, putative, expressed |
- |
| 15 |
Sobic.001G258700 |
- |
- |
| 16 |
Sobic.003G168700 |
"oxidative phosphorylation, ATP production, stroma side of thylakoid membranes"(PubMedID : 8481382)@cytochrome b6, putative, expressed |
K02635: cytochrome b6 |
| 17 |
Sobic.003G029150 |
- |
- |
| 18 |
Sobic.002G074700 |
receptor kinase, putative, expressed |
- |
| 19 |
Sobic.009G184450 |
- |
- |
| 20 |
Sobic.005G194400 |
ribulose bisphosphate carboxylase large chain precursor, putative, expressed |
K01601: ribulose-bisphosphate carboxylase large chain |
Gene co-expression network
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Octagon: transcription factors