Gene annotation
Transcriptome id Sobic.003G421100.1
Synonym CKX1, CKX1, Sb03g045410, ATCKX1, cytokinin oxidase/dehydrogenase1
Functional annotation Increased expression in phyB-1 mutant (PubMedID : 26893475)
cytokinin dehydrogenase precursor, putative, expressed
UniProt C5XHR3
Pfam PF09265 PF01565
Panther DB PTHR13878:SF61 PTHR13878
NCBI CDD -
KEGG Orthology K00279; cytokinin dehydrogenase
Gene Ontology GO:0009690; cytokinin metabolic process GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G41510 : cytokinin oxidase/dehydrogenase 1
RAP-DB (Rice) LOC_Os01g71310.1 : cytokinin dehydrogenase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039159 , Zm00025a026079
Brachypodium KQK06589 , KQK11478
Barley -
Wheat TraesCS3D02G475800 , TraesCS3A02G481000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337975 - -
2 Sobic.002G256400 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
3 Sobic.001G190700 pleiotropic drug resistance protein 3, putative, expressed -
4 Sobic.001G513200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
5 Sobic.003G271000 - -
6 Sobic.006G233400 - -
7 Sobic.010G265100 - -
8 Sobic.006G172100 - -
9 Sobic.003G184600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.004G304900 expressed protein -
11 Sobic.003G287600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
12 Sobic.006G198200 OsFBX151 - F-box domain containing protein, expressed -
13 Sobic.003G243750 - -
14 Sobic.005G175700 ThiF family domain containing protein, putative, expressed -
15 Sobic.001G059001 - -
16 Sobic.001G533600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
17 Sobic.009G153366 - -
18 Sobic.002G216300 - -
19 Sobic.005G150501 - -
20 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic003G421100 Sobic003G421100 Sobic004G337975 Sobic004G337975 Sobic003G421100--Sobic004G337975 Sobic002G256400 Sobic002G256400 Sobic003G421100--Sobic002G256400 Sobic001G190700 Sobic001G190700 Sobic003G421100--Sobic001G190700 Sobic001G513200 Sobic001G513200 Sobic003G421100--Sobic001G513200 Sobic003G271000 Sobic003G271000 Sobic003G421100--Sobic003G271000 Sobic006G233400 Sobic006G233400 Sobic003G421100--Sobic006G233400 Sobic010G265100 Sobic010G265100 Sobic003G421100--Sobic010G265100 Sobic006G172100 Sobic006G172100 Sobic003G421100--Sobic006G172100 Sobic003G184600 Sobic003G184600 Sobic003G421100--Sobic003G184600 Sobic004G337975--Sobic002G256400 Sobic004G337975--Sobic001G190700 Sobic004G337975--Sobic003G421100 Sobic004G337975--Sobic003G271000 Sobic005G175700 Sobic005G175700 Sobic004G337975--Sobic005G175700 Sobic006G198200 Sobic006G198200 Sobic004G337975--Sobic006G198200 Sobic009G020200 Sobic009G020200 Sobic004G337975--Sobic009G020200 Sobic004G337975--Sobic001G513200 Sobic004G337975--Sobic006G172100 Sobic002G256400--Sobic006G172100 Sobic002G256400--Sobic001G190700 Sobic001G059001 Sobic001G059001 Sobic002G256400--Sobic001G059001 Sobic002G256400--Sobic001G513200 Sobic002G256400--Sobic004G337975 Sobic002G256400--Sobic010G265100 Sobic002G256400--Sobic003G271000 Sobic009G109600 Sobic009G109600 Sobic002G256400--Sobic009G109600 Sobic002G256400--Sobic006G233400 Sobic001G190700--Sobic001G513200 Sobic001G190700--Sobic002G256400 Sobic001G190700--Sobic001G059001 Sobic002G076350 Sobic002G076350 Sobic001G190700--Sobic002G076350 Sobic001G190700--Sobic004G337975 Sobic001G190700--Sobic006G172100 Sobic006G048400 Sobic006G048400 Sobic001G190700--Sobic006G048400 Sobic010G133450 Sobic010G133450 Sobic001G190700--Sobic010G133450 Sobic001G190700--Sobic009G109600 Sobic001G513200--Sobic001G190700 Sobic008G047150 Sobic008G047150 Sobic001G513200--Sobic008G047150 Sobic001G513200--Sobic001G059001 Sobic001G513200--Sobic002G256400 Sobic001G513200--Sobic002G076350 Sobic009G064300 Sobic009G064300 Sobic001G513200--Sobic009G064300 Sobic001G513200--Sobic006G172100 Sobic008G067000 Sobic008G067000 Sobic001G513200--Sobic008G067000 Sobic002G181500 Sobic002G181500 Sobic001G513200--Sobic002G181500 Sobic003G271000--Sobic006G233400 Sobic003G271000--Sobic010G265100 Sobic003G308900 Sobic003G308900 Sobic003G271000--Sobic003G308900 Sobic003G271000--Sobic002G256400 Sobic004G304900 Sobic004G304900 Sobic003G271000--Sobic004G304900 Sobic003G271000--Sobic005G175700 Sobic002G296800 Sobic002G296800 Sobic003G271000--Sobic002G296800 Sobic002G377400 Sobic002G377400 Sobic003G271000--Sobic002G377400 Sobic006G150500 Sobic006G150500 Sobic003G271000--Sobic006G150500 Sobic006G233400--Sobic003G271000 Sobic007G133733 Sobic007G133733 Sobic006G233400--Sobic007G133733 Sobic006G233400--Sobic006G150500 Sobic001G074601 Sobic001G074601 Sobic006G233400--Sobic001G074601 Sobic006G233400--Sobic010G265100 Sobic006G233400--Sobic002G256400 Sobic006G233400--Sobic010G133450 Sobic002G324801 Sobic002G324801 Sobic006G233400--Sobic002G324801 Sobic003G336700 Sobic003G336700 Sobic006G233400--Sobic003G336700 Sobic010G265100--Sobic004G304900 Sobic010G265100--Sobic003G271000 Sobic010G265100--Sobic003G308900 Sobic010G265100--Sobic006G233400 Sobic010G265100--Sobic002G256400 Sobic010G265100--Sobic005G175700 Sobic010G265100--Sobic003G184600 Sobic003G243750 Sobic003G243750 Sobic010G265100--Sobic003G243750 Sobic010G265100--Sobic002G377400 Sobic006G172100--Sobic002G256400 Sobic006G172100--Sobic001G059001 Sobic005G137500 Sobic005G137500 Sobic006G172100--Sobic005G137500 Sobic006G172100--Sobic001G190700 Sobic004G193350 Sobic004G193350 Sobic006G172100--Sobic004G193350 Sobic002G216300 Sobic002G216300 Sobic006G172100--Sobic002G216300 Sobic003G375400 Sobic003G375400 Sobic006G172100--Sobic003G375400 Sobic009G153366 Sobic009G153366 Sobic006G172100--Sobic009G153366 Sobic010G183350 Sobic010G183350 Sobic006G172100--Sobic010G183350 Sobic003G184600--Sobic006G198200 Sobic010G025200 Sobic010G025200 Sobic003G184600--Sobic010G025200 Sobic003G184600--Sobic003G243750 Sobic003G184600--Sobic003G308900 Sobic007G044900 Sobic007G044900 Sobic003G184600--Sobic007G044900 Sobic010G213100 Sobic010G213100 Sobic003G184600--Sobic010G213100 Sobic003G184600--Sobic010G265100 Sobic003G184600--Sobic002G377400 Sobic001G223000 Sobic001G223000 Sobic003G184600--Sobic001G223000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.