Gene annotation
Transcriptome id Sobic.006G198200.1
Synonym Sb06g027040
Functional annotation OsFBX151 - F-box domain containing protein, expressed
UniProt A0A1B6PMV3
Pfam PF08268
Panther DB PTHR32133 PTHR32133:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g50200.1 : OsFBX151 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G184600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.004G304900 expressed protein -
3 Sobic.001G533600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
4 Sobic.010G025200 RNA recognition motif containing protein, putative, expressed -
5 Sobic.003G333150 - -
6 Sobic.005G114000 potassium channel protein, putative, expressed -
7 Sobic.010G265100 - -
8 Sobic.009G020200 NBS-LRR type disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
9 Sobic.001G190700 pleiotropic drug resistance protein 3, putative, expressed -
10 Sobic.009G153366 - -
11 Sobic.005G061300 - -
12 Sobic.006G144900 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
13 Sobic.006G029900 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
14 Sobic.002G256400 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
15 Sobic.003G243750 - -
16 Sobic.004G337975 - -
17 Sobic.008G183900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.005G081100 - -
19 Sobic.005G203500 LZ-NBS-LRR class RGA, putative, expressed -
20 Sobic.008G172400 expressed protein -


Gene co-expression network
sample Sobic006G198200 Sobic006G198200 Sobic003G184600 Sobic003G184600 Sobic006G198200--Sobic003G184600 Sobic004G304900 Sobic004G304900 Sobic006G198200--Sobic004G304900 Sobic001G533600 Sobic001G533600 Sobic006G198200--Sobic001G533600 Sobic010G025200 Sobic010G025200 Sobic006G198200--Sobic010G025200 Sobic003G333150 Sobic003G333150 Sobic006G198200--Sobic003G333150 Sobic005G114000 Sobic005G114000 Sobic006G198200--Sobic005G114000 Sobic010G265100 Sobic010G265100 Sobic006G198200--Sobic010G265100 Sobic009G020200 Sobic009G020200 Sobic006G198200--Sobic009G020200 Sobic001G190700 Sobic001G190700 Sobic006G198200--Sobic001G190700 Sobic003G184600--Sobic006G198200 Sobic003G184600--Sobic010G025200 Sobic003G243750 Sobic003G243750 Sobic003G184600--Sobic003G243750 Sobic003G308900 Sobic003G308900 Sobic003G184600--Sobic003G308900 Sobic007G044900 Sobic007G044900 Sobic003G184600--Sobic007G044900 Sobic010G213100 Sobic010G213100 Sobic003G184600--Sobic010G213100 Sobic003G184600--Sobic010G265100 Sobic002G377400 Sobic002G377400 Sobic003G184600--Sobic002G377400 Sobic001G223000 Sobic001G223000 Sobic003G184600--Sobic001G223000 Sobic004G304900--Sobic010G265100 Sobic008G183900 Sobic008G183900 Sobic004G304900--Sobic008G183900 Sobic004G304900--Sobic005G114000 Sobic004G304900--Sobic006G198200 Sobic006G144900 Sobic006G144900 Sobic004G304900--Sobic006G144900 Sobic004G304900--Sobic003G333150 Sobic001G494350 Sobic001G494350 Sobic004G304900--Sobic001G494350 Sobic004G304900--Sobic003G243750 Sobic005G175700 Sobic005G175700 Sobic004G304900--Sobic005G175700 Sobic001G533600--Sobic005G114000 Sobic005G061300 Sobic005G061300 Sobic001G533600--Sobic005G061300 Sobic003G008100 Sobic003G008100 Sobic001G533600--Sobic003G008100 Sobic001G533600--Sobic003G333150 Sobic001G533600--Sobic008G183900 Sobic008G172400 Sobic008G172400 Sobic001G533600--Sobic008G172400 Sobic001G533600--Sobic010G025200 Sobic001G533600--Sobic006G144900 Sobic001G533600--Sobic006G198200 Sobic010G025200--Sobic006G144900 Sobic010G025200--Sobic003G333150 Sobic010G025200--Sobic005G114000 Sobic010G025200--Sobic005G061300 Sobic003G387400 Sobic003G387400 Sobic010G025200--Sobic003G387400 Sobic003G002800 Sobic003G002800 Sobic010G025200--Sobic003G002800 Sobic002G260500 Sobic002G260500 Sobic010G025200--Sobic002G260500 Sobic009G160900 Sobic009G160900 Sobic010G025200--Sobic009G160900 Sobic005G005100 Sobic005G005100 Sobic010G025200--Sobic005G005100 Sobic003G333150--Sobic005G061300 Sobic003G333150--Sobic006G144900 Sobic008G045300 Sobic008G045300 Sobic003G333150--Sobic008G045300 Sobic002G345100 Sobic002G345100 Sobic003G333150--Sobic002G345100 Sobic003G333150--Sobic005G114000 Sobic003G333150--Sobic003G002800 Sobic004G293600 Sobic004G293600 Sobic003G333150--Sobic004G293600 Sobic003G333150--Sobic010G025200 Sobic009G203600 Sobic009G203600 Sobic003G333150--Sobic009G203600 Sobic005G114000--Sobic005G061300 Sobic005G114000--Sobic006G144900 Sobic001G001000 Sobic001G001000 Sobic005G114000--Sobic001G001000 Sobic003G210701 Sobic003G210701 Sobic005G114000--Sobic003G210701 Sobic005G114000--Sobic003G002800 Sobic001G033701 Sobic001G033701 Sobic005G114000--Sobic001G033701 Sobic001G160300 Sobic001G160300 Sobic005G114000--Sobic001G160300 Sobic008G045900 Sobic008G045900 Sobic005G114000--Sobic008G045900 Sobic010G081500 Sobic010G081500 Sobic005G114000--Sobic010G081500 Sobic010G265100--Sobic004G304900 Sobic003G271000 Sobic003G271000 Sobic010G265100--Sobic003G271000 Sobic010G265100--Sobic003G308900 Sobic006G233400 Sobic006G233400 Sobic010G265100--Sobic006G233400 Sobic002G256400 Sobic002G256400 Sobic010G265100--Sobic002G256400 Sobic010G265100--Sobic005G175700 Sobic010G265100--Sobic003G184600 Sobic010G265100--Sobic003G243750 Sobic010G265100--Sobic002G377400 Sobic009G020200--Sobic010G265100 Sobic009G020200--Sobic006G198200 Sobic009G020200--Sobic002G256400 Sobic009G020200--Sobic001G190700 Sobic004G270750 Sobic004G270750 Sobic009G020200--Sobic004G270750 Sobic009G020200--Sobic004G304900 Sobic004G337975 Sobic004G337975 Sobic009G020200--Sobic004G337975 Sobic010G133450 Sobic010G133450 Sobic009G020200--Sobic010G133450 Sobic001G513200 Sobic001G513200 Sobic009G020200--Sobic001G513200 Sobic001G190700--Sobic001G513200 Sobic001G190700--Sobic002G256400 Sobic001G059001 Sobic001G059001 Sobic001G190700--Sobic001G059001 Sobic002G076350 Sobic002G076350 Sobic001G190700--Sobic002G076350 Sobic001G190700--Sobic004G337975 Sobic006G172100 Sobic006G172100 Sobic001G190700--Sobic006G172100 Sobic006G048400 Sobic006G048400 Sobic001G190700--Sobic006G048400 Sobic001G190700--Sobic010G133450 Sobic009G109600 Sobic009G109600 Sobic001G190700--Sobic009G109600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.