Gene annotation
Transcriptome id Sobic.001G533600.1
Synonym Sb01g049680
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
AAA-type ATPase family protein, putative, expressed
UniProt C5X126
Pfam PF00004
Panther DB PTHR23070 PTHR23070:SF25
NCBI CDD KOG0743; AAA+-type ATPase
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT2G46620 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g02330.1 : AAA-type ATPase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006282 , Zm00025a000204 , Zm00025a017411
Brachypodium KQK24032 , KQJ97483 , KQK20476
Barley HORVU1Hr1G093700.1 , HORVU1Hr1G048340.1 , HORVU1Hr1G048340.2 , HORVU1Hr1G048340.3 , HORVU1Hr1G048340.4 , HORVU1Hr1G048340.6 , HORVU5Hr1G035300.1 , HORVU5Hr1G035300.2 , HORVU5Hr1G035300.3 , HORVU5Hr1G035300.4 , HORVU5Hr1G035300.5 , HORVU5Hr1G035300.6 , HORVU5Hr1G035300.7 , HORVU5Hr1G035300.8 , HORVU2Hr1G046310.2 , HORVU2Hr1G046310.3 , HORVU2Hr1G046310.1 , HORVU1Hr1G093760.3 , HORVU1Hr1G093760.6 , HORVU1Hr1G093760.5 , HORVU4Hr1G088930.2
Wheat TraesCS1D02G439400 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS4B02G395500 , TraesCS1D02G438800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G114000 potassium channel protein, putative, expressed -
2 Sobic.005G061300 - -
3 Sobic.003G008100 U-box domain containing protein, expressed -
4 Sobic.003G333150 - -
5 Sobic.008G183900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.008G172400 expressed protein -
7 Sobic.010G025200 RNA recognition motif containing protein, putative, expressed -
8 Sobic.006G144900 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
9 Sobic.006G198200 OsFBX151 - F-box domain containing protein, expressed -
10 Sobic.003G002800 expressed protein -
11 Sobic.001G001000 expressed protein -
12 Sobic.010G266000 uncharacterized protein(PubMedID : 28640841)@expressed protein -
13 Sobic.003G210701 - -
14 Sobic.002G067050 - -
15 Sobic.009G237300 - -
16 Sobic.010G103300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
17 Sobic.001G033701 - -
18 Sobic.002G085700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.005G029866 - -
20 Sobic.008G053700 - -


Gene co-expression network
sample Sobic001G533600 Sobic001G533600 Sobic005G114000 Sobic005G114000 Sobic001G533600--Sobic005G114000 Sobic005G061300 Sobic005G061300 Sobic001G533600--Sobic005G061300 Sobic003G008100 Sobic003G008100 Sobic001G533600--Sobic003G008100 Sobic003G333150 Sobic003G333150 Sobic001G533600--Sobic003G333150 Sobic008G183900 Sobic008G183900 Sobic001G533600--Sobic008G183900 Sobic008G172400 Sobic008G172400 Sobic001G533600--Sobic008G172400 Sobic010G025200 Sobic010G025200 Sobic001G533600--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic001G533600--Sobic006G144900 Sobic006G198200 Sobic006G198200 Sobic001G533600--Sobic006G198200 Sobic005G114000--Sobic005G061300 Sobic005G114000--Sobic006G144900 Sobic001G001000 Sobic001G001000 Sobic005G114000--Sobic001G001000 Sobic003G210701 Sobic003G210701 Sobic005G114000--Sobic003G210701 Sobic003G002800 Sobic003G002800 Sobic005G114000--Sobic003G002800 Sobic001G033701 Sobic001G033701 Sobic005G114000--Sobic001G033701 Sobic001G160300 Sobic001G160300 Sobic005G114000--Sobic001G160300 Sobic008G045900 Sobic008G045900 Sobic005G114000--Sobic008G045900 Sobic010G081500 Sobic010G081500 Sobic005G114000--Sobic010G081500 Sobic005G061300--Sobic003G333150 Sobic005G061300--Sobic005G114000 Sobic005G061300--Sobic006G144900 Sobic005G061300--Sobic008G045900 Sobic002G345100 Sobic002G345100 Sobic005G061300--Sobic002G345100 Sobic005G061300--Sobic001G001000 Sobic005G061300--Sobic003G002800 Sobic005G061300--Sobic003G210701 Sobic002G067050 Sobic002G067050 Sobic005G061300--Sobic002G067050 Sobic002G277900 Sobic002G277900 Sobic003G008100--Sobic002G277900 Sobic010G266000 Sobic010G266000 Sobic003G008100--Sobic010G266000 Sobic003G008100--Sobic001G033701 Sobic004G184900 Sobic004G184900 Sobic003G008100--Sobic004G184900 Sobic004G122700 Sobic004G122700 Sobic003G008100--Sobic004G122700 Sobic010G103300 Sobic010G103300 Sobic003G008100--Sobic010G103300 Sobic008G008701 Sobic008G008701 Sobic003G008100--Sobic008G008701 Sobic004G090900 Sobic004G090900 Sobic003G008100--Sobic004G090900 Sobic002G046500 Sobic002G046500 Sobic003G008100--Sobic002G046500 Sobic003G333150--Sobic005G061300 Sobic003G333150--Sobic006G144900 Sobic008G045300 Sobic008G045300 Sobic003G333150--Sobic008G045300 Sobic003G333150--Sobic002G345100 Sobic003G333150--Sobic005G114000 Sobic003G333150--Sobic003G002800 Sobic004G293600 Sobic004G293600 Sobic003G333150--Sobic004G293600 Sobic003G333150--Sobic010G025200 Sobic009G203600 Sobic009G203600 Sobic003G333150--Sobic009G203600 Sobic008G183900--Sobic005G114000 Sobic004G304900 Sobic004G304900 Sobic008G183900--Sobic004G304900 Sobic008G183900--Sobic005G061300 Sobic008G139200 Sobic008G139200 Sobic008G183900--Sobic008G139200 Sobic008G183900--Sobic008G172400 Sobic008G183900--Sobic006G144900 Sobic008G183900--Sobic001G001000 Sobic008G183900--Sobic003G333150 Sobic005G005100 Sobic005G005100 Sobic008G183900--Sobic005G005100 Sobic008G172400--Sobic005G061300 Sobic008G172400--Sobic001G001000 Sobic008G172400--Sobic005G114000 Sobic005G085800 Sobic005G085800 Sobic008G172400--Sobic005G085800 Sobic008G172400--Sobic003G333150 Sobic005G030200 Sobic005G030200 Sobic008G172400--Sobic005G030200 Sobic008G045232 Sobic008G045232 Sobic008G172400--Sobic008G045232 Sobic002G289701 Sobic002G289701 Sobic008G172400--Sobic002G289701 Sobic002G191300 Sobic002G191300 Sobic008G172400--Sobic002G191300 Sobic010G025200--Sobic006G144900 Sobic010G025200--Sobic003G333150 Sobic010G025200--Sobic005G114000 Sobic010G025200--Sobic005G061300 Sobic003G387400 Sobic003G387400 Sobic010G025200--Sobic003G387400 Sobic010G025200--Sobic003G002800 Sobic002G260500 Sobic002G260500 Sobic010G025200--Sobic002G260500 Sobic009G160900 Sobic009G160900 Sobic010G025200--Sobic009G160900 Sobic010G025200--Sobic005G005100 Sobic006G144900--Sobic002G345100 Sobic006G144900--Sobic003G002800 Sobic006G144900--Sobic010G025200 Sobic006G144900--Sobic003G333150 Sobic006G144900--Sobic002G260500 Sobic009G142600 Sobic009G142600 Sobic006G144900--Sobic009G142600 Sobic006G144900--Sobic009G160900 Sobic006G144900--Sobic005G061300 Sobic006G144900--Sobic003G210701 Sobic003G184600 Sobic003G184600 Sobic006G198200--Sobic003G184600 Sobic006G198200--Sobic004G304900 Sobic006G198200--Sobic001G533600 Sobic006G198200--Sobic010G025200 Sobic006G198200--Sobic003G333150 Sobic006G198200--Sobic005G114000 Sobic010G265100 Sobic010G265100 Sobic006G198200--Sobic010G265100 Sobic009G020200 Sobic009G020200 Sobic006G198200--Sobic009G020200 Sobic001G190700 Sobic001G190700 Sobic006G198200--Sobic001G190700
Octagon: transcription factors


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