Gene annotation
Transcriptome id Sobic.009G020200.1,Sobic.009G020200.2
Synonym Sb09g001800, RPS3, RPM1
Functional annotation NBS-LRR type disease resistance protein, putative, expressed
UniProt A0A1Z5R0F4 , A0A1Z5R1N6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF551
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g16370.2,LOC_Os01g16400.1 : NBS-LRR type disease resistance protein, putative, expressed,NB-ARC domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G388800 , TraesCS1B02G403400 , TraesCS1B02G403300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G265100 - -
2 Sobic.006G198200 OsFBX151 - F-box domain containing protein, expressed -
3 Sobic.002G256400 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
4 Sobic.001G190700 pleiotropic drug resistance protein 3, putative, expressed -
5 Sobic.004G270750 - -
6 Sobic.004G304900 expressed protein -
7 Sobic.004G337975 - -
8 Sobic.010G133450 - -
9 Sobic.001G513200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
10 Sobic.003G271000 - -
11 Sobic.006G172100 - -
12 Sobic.009G175800 B3 DNA binding domain containing protein, expressed -
13 Sobic.001G059001 - -
14 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
15 Sobic.006G233400 - -
16 Sobic.004G242800 - -
17 Sobic.002G070901 - -
18 Sobic.002G164900 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.009G069400 - -
20 Sobic.003G184600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic009G020200 Sobic009G020200 Sobic010G265100 Sobic010G265100 Sobic009G020200--Sobic010G265100 Sobic006G198200 Sobic006G198200 Sobic009G020200--Sobic006G198200 Sobic002G256400 Sobic002G256400 Sobic009G020200--Sobic002G256400 Sobic001G190700 Sobic001G190700 Sobic009G020200--Sobic001G190700 Sobic004G270750 Sobic004G270750 Sobic009G020200--Sobic004G270750 Sobic004G304900 Sobic004G304900 Sobic009G020200--Sobic004G304900 Sobic004G337975 Sobic004G337975 Sobic009G020200--Sobic004G337975 Sobic010G133450 Sobic010G133450 Sobic009G020200--Sobic010G133450 Sobic001G513200 Sobic001G513200 Sobic009G020200--Sobic001G513200 Sobic010G265100--Sobic004G304900 Sobic003G271000 Sobic003G271000 Sobic010G265100--Sobic003G271000 Sobic003G308900 Sobic003G308900 Sobic010G265100--Sobic003G308900 Sobic006G233400 Sobic006G233400 Sobic010G265100--Sobic006G233400 Sobic010G265100--Sobic002G256400 Sobic005G175700 Sobic005G175700 Sobic010G265100--Sobic005G175700 Sobic003G184600 Sobic003G184600 Sobic010G265100--Sobic003G184600 Sobic003G243750 Sobic003G243750 Sobic010G265100--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic010G265100--Sobic002G377400 Sobic006G198200--Sobic003G184600 Sobic006G198200--Sobic004G304900 Sobic001G533600 Sobic001G533600 Sobic006G198200--Sobic001G533600 Sobic010G025200 Sobic010G025200 Sobic006G198200--Sobic010G025200 Sobic003G333150 Sobic003G333150 Sobic006G198200--Sobic003G333150 Sobic005G114000 Sobic005G114000 Sobic006G198200--Sobic005G114000 Sobic006G198200--Sobic010G265100 Sobic006G198200--Sobic009G020200 Sobic006G198200--Sobic001G190700 Sobic006G172100 Sobic006G172100 Sobic002G256400--Sobic006G172100 Sobic002G256400--Sobic001G190700 Sobic001G059001 Sobic001G059001 Sobic002G256400--Sobic001G059001 Sobic002G256400--Sobic001G513200 Sobic002G256400--Sobic004G337975 Sobic002G256400--Sobic010G265100 Sobic002G256400--Sobic003G271000 Sobic009G109600 Sobic009G109600 Sobic002G256400--Sobic009G109600 Sobic002G256400--Sobic006G233400 Sobic001G190700--Sobic001G513200 Sobic001G190700--Sobic002G256400 Sobic001G190700--Sobic001G059001 Sobic002G076350 Sobic002G076350 Sobic001G190700--Sobic002G076350 Sobic001G190700--Sobic004G337975 Sobic001G190700--Sobic006G172100 Sobic006G048400 Sobic006G048400 Sobic001G190700--Sobic006G048400 Sobic001G190700--Sobic010G133450 Sobic001G190700--Sobic009G109600 Sobic001G020350 Sobic001G020350 Sobic004G270750--Sobic001G020350 Sobic003G375400 Sobic003G375400 Sobic004G270750--Sobic003G375400 Sobic009G236900 Sobic009G236900 Sobic004G270750--Sobic009G236900 Sobic008G122250 Sobic008G122250 Sobic004G270750--Sobic008G122250 Sobic004G270750--Sobic009G020200 Sobic002G232300 Sobic002G232300 Sobic004G270750--Sobic002G232300 Sobic009G175800 Sobic009G175800 Sobic004G270750--Sobic009G175800 Sobic004G270750--Sobic006G172100 Sobic003G330350 Sobic003G330350 Sobic004G270750--Sobic003G330350 Sobic004G304900--Sobic010G265100 Sobic008G183900 Sobic008G183900 Sobic004G304900--Sobic008G183900 Sobic004G304900--Sobic005G114000 Sobic004G304900--Sobic006G198200 Sobic006G144900 Sobic006G144900 Sobic004G304900--Sobic006G144900 Sobic004G304900--Sobic003G333150 Sobic001G494350 Sobic001G494350 Sobic004G304900--Sobic001G494350 Sobic004G304900--Sobic003G243750 Sobic004G304900--Sobic005G175700 Sobic004G337975--Sobic002G256400 Sobic004G337975--Sobic001G190700 Sobic003G421100 Sobic003G421100 Sobic004G337975--Sobic003G421100 Sobic004G337975--Sobic003G271000 Sobic004G337975--Sobic005G175700 Sobic004G337975--Sobic006G198200 Sobic004G337975--Sobic009G020200 Sobic004G337975--Sobic001G513200 Sobic004G337975--Sobic006G172100 Sobic003G174500 Sobic003G174500 Sobic010G133450--Sobic003G174500 Sobic010G129100 Sobic010G129100 Sobic010G133450--Sobic010G129100 Sobic009G094200 Sobic009G094200 Sobic010G133450--Sobic009G094200 Sobic009G088300 Sobic009G088300 Sobic010G133450--Sobic009G088300 Sobic003G263900 Sobic003G263900 Sobic010G133450--Sobic003G263900 Sobic001G261452 Sobic001G261452 Sobic010G133450--Sobic001G261452 Sobic004G127600 Sobic004G127600 Sobic010G133450--Sobic004G127600 Sobic003G410000 Sobic003G410000 Sobic010G133450--Sobic003G410000 Sobic006G255200 Sobic006G255200 Sobic010G133450--Sobic006G255200 Sobic001G513200--Sobic001G190700 Sobic008G047150 Sobic008G047150 Sobic001G513200--Sobic008G047150 Sobic001G513200--Sobic001G059001 Sobic001G513200--Sobic002G256400 Sobic001G513200--Sobic002G076350 Sobic009G064300 Sobic009G064300 Sobic001G513200--Sobic009G064300 Sobic001G513200--Sobic006G172100 Sobic008G067000 Sobic008G067000 Sobic001G513200--Sobic008G067000 Sobic002G181500 Sobic002G181500 Sobic001G513200--Sobic002G181500
Octagon: transcription factors


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