Gene annotation
Transcriptome id Sobic.004G337975.2,Sobic.004G337975.1
Synonym -
Functional annotation -
UniProt A0A1Z5RQQ3 , A0A1Z5RQ92
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G256400 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
2 Sobic.001G190700 pleiotropic drug resistance protein 3, putative, expressed -
3 Sobic.003G421100 Increased expression in phyB-1 mutant(PubMedID : 26893475)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
4 Sobic.003G271000 - -
5 Sobic.005G175700 ThiF family domain containing protein, putative, expressed -
6 Sobic.006G198200 OsFBX151 - F-box domain containing protein, expressed -
7 Sobic.009G020200 NBS-LRR type disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.001G513200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
9 Sobic.006G172100 - -
10 Sobic.010G265100 - -
11 Sobic.006G233400 - -
12 Sobic.004G304900 expressed protein -
13 Sobic.009G111050 - -
14 Sobic.003G385201 - -
15 Sobic.004G270750 - -
16 Sobic.006G029900 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
17 Sobic.003G184600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.009G153366 - -
19 Sobic.001G059001 - -
20 Sobic.001G533600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G337975 Sobic004G337975 Sobic002G256400 Sobic002G256400 Sobic004G337975--Sobic002G256400 Sobic001G190700 Sobic001G190700 Sobic004G337975--Sobic001G190700 Sobic003G421100 Sobic003G421100 Sobic004G337975--Sobic003G421100 Sobic003G271000 Sobic003G271000 Sobic004G337975--Sobic003G271000 Sobic005G175700 Sobic005G175700 Sobic004G337975--Sobic005G175700 Sobic006G198200 Sobic006G198200 Sobic004G337975--Sobic006G198200 Sobic009G020200 Sobic009G020200 Sobic004G337975--Sobic009G020200 Sobic001G513200 Sobic001G513200 Sobic004G337975--Sobic001G513200 Sobic006G172100 Sobic006G172100 Sobic004G337975--Sobic006G172100 Sobic002G256400--Sobic006G172100 Sobic002G256400--Sobic001G190700 Sobic001G059001 Sobic001G059001 Sobic002G256400--Sobic001G059001 Sobic002G256400--Sobic001G513200 Sobic002G256400--Sobic004G337975 Sobic010G265100 Sobic010G265100 Sobic002G256400--Sobic010G265100 Sobic002G256400--Sobic003G271000 Sobic009G109600 Sobic009G109600 Sobic002G256400--Sobic009G109600 Sobic006G233400 Sobic006G233400 Sobic002G256400--Sobic006G233400 Sobic001G190700--Sobic001G513200 Sobic001G190700--Sobic002G256400 Sobic001G190700--Sobic001G059001 Sobic002G076350 Sobic002G076350 Sobic001G190700--Sobic002G076350 Sobic001G190700--Sobic004G337975 Sobic001G190700--Sobic006G172100 Sobic006G048400 Sobic006G048400 Sobic001G190700--Sobic006G048400 Sobic010G133450 Sobic010G133450 Sobic001G190700--Sobic010G133450 Sobic001G190700--Sobic009G109600 Sobic003G421100--Sobic004G337975 Sobic003G421100--Sobic002G256400 Sobic003G421100--Sobic001G190700 Sobic003G421100--Sobic001G513200 Sobic003G421100--Sobic003G271000 Sobic003G421100--Sobic006G233400 Sobic003G421100--Sobic010G265100 Sobic003G421100--Sobic006G172100 Sobic003G184600 Sobic003G184600 Sobic003G421100--Sobic003G184600 Sobic003G271000--Sobic006G233400 Sobic003G271000--Sobic010G265100 Sobic003G308900 Sobic003G308900 Sobic003G271000--Sobic003G308900 Sobic003G271000--Sobic002G256400 Sobic004G304900 Sobic004G304900 Sobic003G271000--Sobic004G304900 Sobic003G271000--Sobic005G175700 Sobic002G296800 Sobic002G296800 Sobic003G271000--Sobic002G296800 Sobic002G377400 Sobic002G377400 Sobic003G271000--Sobic002G377400 Sobic006G150500 Sobic006G150500 Sobic003G271000--Sobic006G150500 Sobic005G175700--Sobic004G304900 Sobic005G175700--Sobic010G265100 Sobic005G175700--Sobic003G271000 Sobic008G183900 Sobic008G183900 Sobic005G175700--Sobic008G183900 Sobic005G175700--Sobic004G337975 Sobic010G244150 Sobic010G244150 Sobic005G175700--Sobic010G244150 Sobic005G203500 Sobic005G203500 Sobic005G175700--Sobic005G203500 Sobic008G172400 Sobic008G172400 Sobic005G175700--Sobic008G172400 Sobic005G175700--Sobic006G233400 Sobic006G198200--Sobic003G184600 Sobic006G198200--Sobic004G304900 Sobic001G533600 Sobic001G533600 Sobic006G198200--Sobic001G533600 Sobic010G025200 Sobic010G025200 Sobic006G198200--Sobic010G025200 Sobic003G333150 Sobic003G333150 Sobic006G198200--Sobic003G333150 Sobic005G114000 Sobic005G114000 Sobic006G198200--Sobic005G114000 Sobic006G198200--Sobic010G265100 Sobic006G198200--Sobic009G020200 Sobic006G198200--Sobic001G190700 Sobic009G020200--Sobic010G265100 Sobic009G020200--Sobic006G198200 Sobic009G020200--Sobic002G256400 Sobic009G020200--Sobic001G190700 Sobic004G270750 Sobic004G270750 Sobic009G020200--Sobic004G270750 Sobic009G020200--Sobic004G304900 Sobic009G020200--Sobic004G337975 Sobic009G020200--Sobic010G133450 Sobic009G020200--Sobic001G513200 Sobic001G513200--Sobic001G190700 Sobic008G047150 Sobic008G047150 Sobic001G513200--Sobic008G047150 Sobic001G513200--Sobic001G059001 Sobic001G513200--Sobic002G256400 Sobic001G513200--Sobic002G076350 Sobic009G064300 Sobic009G064300 Sobic001G513200--Sobic009G064300 Sobic001G513200--Sobic006G172100 Sobic008G067000 Sobic008G067000 Sobic001G513200--Sobic008G067000 Sobic002G181500 Sobic002G181500 Sobic001G513200--Sobic002G181500 Sobic006G172100--Sobic002G256400 Sobic006G172100--Sobic001G059001 Sobic005G137500 Sobic005G137500 Sobic006G172100--Sobic005G137500 Sobic006G172100--Sobic001G190700 Sobic004G193350 Sobic004G193350 Sobic006G172100--Sobic004G193350 Sobic002G216300 Sobic002G216300 Sobic006G172100--Sobic002G216300 Sobic003G375400 Sobic003G375400 Sobic006G172100--Sobic003G375400 Sobic009G153366 Sobic009G153366 Sobic006G172100--Sobic009G153366 Sobic010G183350 Sobic010G183350 Sobic006G172100--Sobic010G183350
Octagon: transcription factors


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