Gene annotation
Transcriptome id Sobic.002G256400.2,Sobic.002G256400.1,Sobic.002G256400.4,Sobic.002G256400.3
Synonym Sb02g029155
Functional annotation expressed protein
UniProt A0A1W0W5W9 , A0A1B6QDH5 , A0A1W0W5T8
Pfam PF12928
Panther DB PTHR21027
NCBI CDD -
KEGG Orthology K15326; tRNA-splicing endonuclease subunit Sen54
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57360 : -
RAP-DB (Rice) LOC_Os09g32700.1 : expressed protein
MaizeGDB (Corn) Zm00025a014291
Brachypodium KQJ90904
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172100 - -
2 Sobic.001G190700 pleiotropic drug resistance protein 3, putative, expressed -
3 Sobic.001G059001 - -
4 Sobic.001G513200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
5 Sobic.004G337975 - -
6 Sobic.010G265100 - -
7 Sobic.003G271000 - -
8 Sobic.009G109600 expressed protein -
9 Sobic.006G233400 - -
10 Sobic.009G153366 - -
11 Sobic.005G150501 - -
12 Sobic.009G020200 NBS-LRR type disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.006G198200 OsFBX151 - F-box domain containing protein, expressed -
14 Sobic.003G184600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.007G133733 - -
16 Sobic.003G421100 Increased expression in phyB-1 mutant(PubMedID : 26893475)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
17 Sobic.006G048400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G137500 - -
19 Sobic.002G076350 - -
20 Sobic.009G064300 cytokinin-O-glucosyltransferase 1, putative, expressed -


Gene co-expression network
sample Sobic002G256400 Sobic002G256400 Sobic006G172100 Sobic006G172100 Sobic002G256400--Sobic006G172100 Sobic001G190700 Sobic001G190700 Sobic002G256400--Sobic001G190700 Sobic001G059001 Sobic001G059001 Sobic002G256400--Sobic001G059001 Sobic001G513200 Sobic001G513200 Sobic002G256400--Sobic001G513200 Sobic004G337975 Sobic004G337975 Sobic002G256400--Sobic004G337975 Sobic010G265100 Sobic010G265100 Sobic002G256400--Sobic010G265100 Sobic003G271000 Sobic003G271000 Sobic002G256400--Sobic003G271000 Sobic009G109600 Sobic009G109600 Sobic002G256400--Sobic009G109600 Sobic006G233400 Sobic006G233400 Sobic002G256400--Sobic006G233400 Sobic006G172100--Sobic002G256400 Sobic006G172100--Sobic001G059001 Sobic005G137500 Sobic005G137500 Sobic006G172100--Sobic005G137500 Sobic006G172100--Sobic001G190700 Sobic004G193350 Sobic004G193350 Sobic006G172100--Sobic004G193350 Sobic002G216300 Sobic002G216300 Sobic006G172100--Sobic002G216300 Sobic003G375400 Sobic003G375400 Sobic006G172100--Sobic003G375400 Sobic009G153366 Sobic009G153366 Sobic006G172100--Sobic009G153366 Sobic010G183350 Sobic010G183350 Sobic006G172100--Sobic010G183350 Sobic001G190700--Sobic001G513200 Sobic001G190700--Sobic002G256400 Sobic001G190700--Sobic001G059001 Sobic002G076350 Sobic002G076350 Sobic001G190700--Sobic002G076350 Sobic001G190700--Sobic004G337975 Sobic001G190700--Sobic006G172100 Sobic006G048400 Sobic006G048400 Sobic001G190700--Sobic006G048400 Sobic010G133450 Sobic010G133450 Sobic001G190700--Sobic010G133450 Sobic001G190700--Sobic009G109600 Sobic009G064300 Sobic009G064300 Sobic001G059001--Sobic009G064300 Sobic001G059001--Sobic005G137500 Sobic001G190900 Sobic001G190900 Sobic001G059001--Sobic001G190900 Sobic003G312900 Sobic003G312900 Sobic001G059001--Sobic003G312900 Sobic003G312800 Sobic003G312800 Sobic001G059001--Sobic003G312800 Sobic005G152866 Sobic005G152866 Sobic001G059001--Sobic005G152866 Sobic008G072800 Sobic008G072800 Sobic001G059001--Sobic008G072800 Sobic002G012100 Sobic002G012100 Sobic001G059001--Sobic002G012100 Sobic001G059001--Sobic010G183350 Sobic001G513200--Sobic001G190700 Sobic008G047150 Sobic008G047150 Sobic001G513200--Sobic008G047150 Sobic001G513200--Sobic001G059001 Sobic001G513200--Sobic002G256400 Sobic001G513200--Sobic002G076350 Sobic001G513200--Sobic009G064300 Sobic001G513200--Sobic006G172100 Sobic008G067000 Sobic008G067000 Sobic001G513200--Sobic008G067000 Sobic002G181500 Sobic002G181500 Sobic001G513200--Sobic002G181500 Sobic004G337975--Sobic002G256400 Sobic004G337975--Sobic001G190700 Sobic003G421100 Sobic003G421100 Sobic004G337975--Sobic003G421100 Sobic004G337975--Sobic003G271000 Sobic005G175700 Sobic005G175700 Sobic004G337975--Sobic005G175700 Sobic006G198200 Sobic006G198200 Sobic004G337975--Sobic006G198200 Sobic009G020200 Sobic009G020200 Sobic004G337975--Sobic009G020200 Sobic004G337975--Sobic001G513200 Sobic004G337975--Sobic006G172100 Sobic004G304900 Sobic004G304900 Sobic010G265100--Sobic004G304900 Sobic010G265100--Sobic003G271000 Sobic003G308900 Sobic003G308900 Sobic010G265100--Sobic003G308900 Sobic010G265100--Sobic006G233400 Sobic010G265100--Sobic002G256400 Sobic010G265100--Sobic005G175700 Sobic003G184600 Sobic003G184600 Sobic010G265100--Sobic003G184600 Sobic003G243750 Sobic003G243750 Sobic010G265100--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic010G265100--Sobic002G377400 Sobic003G271000--Sobic006G233400 Sobic003G271000--Sobic010G265100 Sobic003G271000--Sobic003G308900 Sobic003G271000--Sobic002G256400 Sobic003G271000--Sobic004G304900 Sobic003G271000--Sobic005G175700 Sobic002G296800 Sobic002G296800 Sobic003G271000--Sobic002G296800 Sobic003G271000--Sobic002G377400 Sobic006G150500 Sobic006G150500 Sobic003G271000--Sobic006G150500 Sobic009G109600--Sobic006G048400 Sobic009G109600--Sobic001G059001 Sobic009G109600--Sobic002G076350 Sobic010G142501 Sobic010G142501 Sobic009G109600--Sobic010G142501 Sobic003G053750 Sobic003G053750 Sobic009G109600--Sobic003G053750 Sobic006G052250 Sobic006G052250 Sobic009G109600--Sobic006G052250 Sobic006G146700 Sobic006G146700 Sobic009G109600--Sobic006G146700 Sobic009G109600--Sobic001G190900 Sobic009G146500 Sobic009G146500 Sobic009G109600--Sobic009G146500 Sobic006G233400--Sobic003G271000 Sobic007G133733 Sobic007G133733 Sobic006G233400--Sobic007G133733 Sobic006G233400--Sobic006G150500 Sobic001G074601 Sobic001G074601 Sobic006G233400--Sobic001G074601 Sobic006G233400--Sobic010G265100 Sobic006G233400--Sobic002G256400 Sobic006G233400--Sobic010G133450 Sobic002G324801 Sobic002G324801 Sobic006G233400--Sobic002G324801 Sobic003G336700 Sobic003G336700 Sobic006G233400--Sobic003G336700
Octagon: transcription factors


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