Gene annotation
Transcriptome id Sobic.004G167600.3,Sobic.004G167600.11,Sobic.004G167600.6,Sobic.004G167600.8,Sobic.004G167600.10,Sobic.004G167600.2,Sobic.004G167600.9,Sobic.004G167600.5,Sobic.004G167600.13,Sobic.004G167600.16,Sobic.004G167600.7,Sobic.004G167600.15,Sobic.004G167600.14,Sobic.004G167600.4,Sobic.004G167600.12
Synonym RSZ33, Sb04g021900, ATRSZ33
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1Z5RNN3 , A0A1Z5RMZ8
Pfam PF00098 PF00076
Panther DB -
NCBI CDD KOG0114; Predicted RNA-binding protein (RRM superfamily)
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT2G37340 : arginine/serine-rich zinc knuckle-containing protein 33
RAP-DB (Rice) LOC_Os02g33320.2,LOC_Os02g33320.1,LOC_Os02g33320.3 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99753 , KQJ99754 , KQJ99755 , KQJ99756 , KQJ99757
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073550 - -
2 Sobic.006G257400 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.008G152400 H-BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
4 Sobic.010G088100 ADP-ribosylation factor 1, putative, expressed K07977: Arf/Sar family, other
5 Sobic.002G033200 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
6 Sobic.001G181400 - -
7 Sobic.003G124400 - -
8 Sobic.009G137401 - -
9 Sobic.001G001800 expressed protein -
10 Sobic.001G335800 "qGW7/GL7(Ortholog in rice:Wang et al., 2015, Wang et al., 2015)"(PubMedID : 31659841)@expressed protein -
11 Sobic.009G094200 - -
12 Sobic.002G025100 expressed protein -
13 Sobic.004G084600 similar to Putative uncharacterized protein(PubMedID : 29862293)@AP2 domain containing protein, expressed -
14 Sobic.010G183350 - -
15 Sobic.003G375500 PHD-finger domain containing protein, putative, expressed -
16 Sobic.001G528900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G192450 - -
18 Sobic.001G454600 expressed protein -
19 Sobic.001G190900 ABCG protein(PubMedID : 21265893)@"Orthologous gene of wheat Lr34 gene, expressed in accession AusTRCF 302546, but not expreesed in BTx623 possibly due to transposon insertions in intron 4"(PubMedID : 23117720)@pleiotropic drug resistance protein 15, putative, expressed -
20 Sobic.004G030850 - -


Gene co-expression network
sample Sobic004G167600 Sobic004G167600 Sobic001G073550 Sobic001G073550 Sobic004G167600--Sobic001G073550 Sobic006G257400 Sobic006G257400 Sobic004G167600--Sobic006G257400 Sobic008G152400 Sobic008G152400 Sobic004G167600--Sobic008G152400 Sobic010G088100 Sobic010G088100 Sobic004G167600--Sobic010G088100 Sobic002G033200 Sobic002G033200 Sobic004G167600--Sobic002G033200 Sobic001G181400 Sobic001G181400 Sobic004G167600--Sobic001G181400 Sobic003G124400 Sobic003G124400 Sobic004G167600--Sobic003G124400 Sobic009G137401 Sobic009G137401 Sobic004G167600--Sobic009G137401 Sobic001G001800 Sobic001G001800 Sobic004G167600--Sobic001G001800 Sobic001G073550--Sobic004G167600 Sobic010G163666 Sobic010G163666 Sobic001G073550--Sobic010G163666 Sobic001G073550--Sobic006G257400 Sobic003G368450 Sobic003G368450 Sobic001G073550--Sobic003G368450 Sobic006G122000 Sobic006G122000 Sobic001G073550--Sobic006G122000 Sobic001G222150 Sobic001G222150 Sobic001G073550--Sobic001G222150 Sobic004G160350 Sobic004G160350 Sobic001G073550--Sobic004G160350 Sobic003G069400 Sobic003G069400 Sobic001G073550--Sobic003G069400 Sobic009G058900 Sobic009G058900 Sobic001G073550--Sobic009G058900 Sobic001G528900 Sobic001G528900 Sobic006G257400--Sobic001G528900 Sobic006G257400--Sobic009G137401 Sobic006G257400--Sobic001G073550 Sobic007G155950 Sobic007G155950 Sobic006G257400--Sobic007G155950 Sobic002G171901 Sobic002G171901 Sobic006G257400--Sobic002G171901 Sobic003G334400 Sobic003G334400 Sobic006G257400--Sobic003G334400 Sobic006G257400--Sobic004G167600 Sobic001G229850 Sobic001G229850 Sobic006G257400--Sobic001G229850 Sobic003G058300 Sobic003G058300 Sobic006G257400--Sobic003G058300 Sobic006G165900 Sobic006G165900 Sobic008G152400--Sobic006G165900 Sobic008G152400--Sobic004G167600 Sobic005G169900 Sobic005G169900 Sobic008G152400--Sobic005G169900 Sobic007G114401 Sobic007G114401 Sobic008G152400--Sobic007G114401 Sobic004G125701 Sobic004G125701 Sobic008G152400--Sobic004G125701 Sobic001G517900 Sobic001G517900 Sobic008G152400--Sobic001G517900 Sobic002G275400 Sobic002G275400 Sobic008G152400--Sobic002G275400 Sobic003G137300 Sobic003G137300 Sobic008G152400--Sobic003G137300 Sobic004G224400 Sobic004G224400 Sobic008G152400--Sobic004G224400 Sobic004G030850 Sobic004G030850 Sobic010G088100--Sobic004G030850 Sobic004G084600 Sobic004G084600 Sobic010G088100--Sobic004G084600 Sobic010G088100--Sobic003G058300 Sobic004G118000 Sobic004G118000 Sobic010G088100--Sobic004G118000 Sobic010G088100--Sobic002G171901 Sobic010G088100--Sobic002G033200 Sobic010G088100--Sobic009G137401 Sobic003G336550 Sobic003G336550 Sobic010G088100--Sobic003G336550 Sobic001G191500 Sobic001G191500 Sobic010G088100--Sobic001G191500 Sobic004G118300 Sobic004G118300 Sobic002G033200--Sobic004G118300 Sobic003G329300 Sobic003G329300 Sobic002G033200--Sobic003G329300 Sobic002G033200--Sobic004G030850 Sobic004G117850 Sobic004G117850 Sobic002G033200--Sobic004G117850 Sobic006G111000 Sobic006G111000 Sobic002G033200--Sobic006G111000 Sobic002G033200--Sobic009G137401 Sobic008G113200 Sobic008G113200 Sobic002G033200--Sobic008G113200 Sobic002G033200--Sobic010G088100 Sobic001G090700 Sobic001G090700 Sobic002G033200--Sobic001G090700 Sobic010G058600 Sobic010G058600 Sobic001G181400--Sobic010G058600 Sobic004G223800 Sobic004G223800 Sobic001G181400--Sobic004G223800 Sobic001G181400--Sobic001G222150 Sobic010G122300 Sobic010G122300 Sobic001G181400--Sobic010G122300 Sobic001G181400--Sobic009G058900 Sobic005G036450 Sobic005G036450 Sobic001G181400--Sobic005G036450 Sobic001G181400--Sobic001G073550 Sobic007G199901 Sobic007G199901 Sobic001G181400--Sobic007G199901 Sobic008G039200 Sobic008G039200 Sobic001G181400--Sobic008G039200 Sobic005G068000 Sobic005G068000 Sobic003G124400--Sobic005G068000 Sobic001G079000 Sobic001G079000 Sobic003G124400--Sobic001G079000 Sobic001G239000 Sobic001G239000 Sobic003G124400--Sobic001G239000 Sobic003G375500 Sobic003G375500 Sobic003G124400--Sobic003G375500 Sobic008G037300 Sobic008G037300 Sobic003G124400--Sobic008G037300 Sobic005G027350 Sobic005G027350 Sobic003G124400--Sobic005G027350 Sobic010G183350 Sobic010G183350 Sobic003G124400--Sobic010G183350 Sobic009G026600 Sobic009G026600 Sobic003G124400--Sobic009G026600 Sobic003G312800 Sobic003G312800 Sobic003G124400--Sobic003G312800 Sobic009G137401--Sobic001G191500 Sobic001G190900 Sobic001G190900 Sobic009G137401--Sobic001G190900 Sobic003G053750 Sobic003G053750 Sobic009G137401--Sobic003G053750 Sobic009G137401--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic009G137401--Sobic003G429600 Sobic009G137401--Sobic008G113200 Sobic009G137401--Sobic001G528900 Sobic008G083100 Sobic008G083100 Sobic009G137401--Sobic008G083100 Sobic006G072701 Sobic006G072701 Sobic009G137401--Sobic006G072701 Sobic004G033650 Sobic004G033650 Sobic001G001800--Sobic004G033650 Sobic009G094200 Sobic009G094200 Sobic001G001800--Sobic009G094200 Sobic001G001800--Sobic009G026600 Sobic009G074800 Sobic009G074800 Sobic001G001800--Sobic009G074800 Sobic008G142200 Sobic008G142200 Sobic001G001800--Sobic008G142200 Sobic001G001800--Sobic001G191500 Sobic009G026700 Sobic009G026700 Sobic001G001800--Sobic009G026700 Sobic009G186300 Sobic009G186300 Sobic001G001800--Sobic009G186300 Sobic001G038700 Sobic001G038700 Sobic001G001800--Sobic001G038700
Octagon: transcription factors


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