Gene annotation
Transcriptome id Sobic.004G294600.1
Synonym Sb04g032850
Functional annotation expressed protein
UniProt A0A1Z5RPS5
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g39310.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G294600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G029900 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
2 Sobic.001G377600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
3 Sobic.007G128400 expressed protein -
4 Sobic.006G250200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.008G072900 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.010G067200 receptor-like protein kinase precursor, putative, expressed -
7 Sobic.008G176300 YABBY domain containing protein, putative, expressed -
8 Sobic.001G171100 expressed protein -
9 Sobic.003G027200 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.005G153500 - -
11 Sobic.009G006800 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed -
12 Sobic.010G137700 - -
13 Sobic.005G174600 - -
14 Sobic.002G122000 - -
15 Sobic.005G141500 - -
16 Sobic.003G415800 DEF9 - Defensin and Defensin-like DEFL family, expressed -
17 Sobic.001G270600 - -
18 Sobic.005G221200 - -
19 Sobic.003G135201 - -
20 Sobic.005G109900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase


Gene co-expression network
sample Sobic004G294600 Sobic004G294600 Sobic003G029900 Sobic003G029900 Sobic004G294600--Sobic003G029900 Sobic001G377600 Sobic001G377600 Sobic004G294600--Sobic001G377600 Sobic007G128400 Sobic007G128400 Sobic004G294600--Sobic007G128400 Sobic006G250200 Sobic006G250200 Sobic004G294600--Sobic006G250200 Sobic008G072900 Sobic008G072900 Sobic004G294600--Sobic008G072900 Sobic010G067200 Sobic010G067200 Sobic004G294600--Sobic010G067200 Sobic008G176300 Sobic008G176300 Sobic004G294600--Sobic008G176300 Sobic001G171100 Sobic001G171100 Sobic004G294600--Sobic001G171100 Sobic003G027200 Sobic003G027200 Sobic004G294600--Sobic003G027200 Sobic003G029900--Sobic001G377600 Sobic003G029900--Sobic008G072900 Sobic003G029900--Sobic003G027200 Sobic003G029900--Sobic004G294600 Sobic003G029900--Sobic001G171100 Sobic003G029900--Sobic010G067200 Sobic003G029900--Sobic007G128400 Sobic003G022900 Sobic003G022900 Sobic003G029900--Sobic003G022900 Sobic003G029900--Sobic006G250200 Sobic001G377600--Sobic003G029900 Sobic001G377600--Sobic008G072900 Sobic001G377600--Sobic003G027200 Sobic001G377600--Sobic004G294600 Sobic001G377600--Sobic001G171100 Sobic001G377600--Sobic006G250200 Sobic005G164800 Sobic005G164800 Sobic001G377600--Sobic005G164800 Sobic001G377600--Sobic010G067200 Sobic003G381100 Sobic003G381100 Sobic001G377600--Sobic003G381100 Sobic006G117300 Sobic006G117300 Sobic007G128400--Sobic006G117300 Sobic007G040000 Sobic007G040000 Sobic007G128400--Sobic007G040000 Sobic005G174500 Sobic005G174500 Sobic007G128400--Sobic005G174500 Sobic009G090250 Sobic009G090250 Sobic007G128400--Sobic009G090250 Sobic001G246400 Sobic001G246400 Sobic007G128400--Sobic001G246400 Sobic003G321500 Sobic003G321500 Sobic007G128400--Sobic003G321500 Sobic002G089500 Sobic002G089500 Sobic007G128400--Sobic002G089500 Sobic002G267700 Sobic002G267700 Sobic007G128400--Sobic002G267700 Sobic001G392900 Sobic001G392900 Sobic007G128400--Sobic001G392900 Sobic002G049800 Sobic002G049800 Sobic006G250200--Sobic002G049800 Sobic008G181200 Sobic008G181200 Sobic006G250200--Sobic008G181200 Sobic005G037800 Sobic005G037800 Sobic006G250200--Sobic005G037800 Sobic010G137700 Sobic010G137700 Sobic006G250200--Sobic010G137700 Sobic005G226800 Sobic005G226800 Sobic006G250200--Sobic005G226800 Sobic005G177200 Sobic005G177200 Sobic006G250200--Sobic005G177200 Sobic002G238900 Sobic002G238900 Sobic006G250200--Sobic002G238900 Sobic009G062300 Sobic009G062300 Sobic006G250200--Sobic009G062300 Sobic008G184400 Sobic008G184400 Sobic006G250200--Sobic008G184400 Sobic008G072900--Sobic003G027200 Sobic008G072900--Sobic003G381100 Sobic008G072900--Sobic001G377600 Sobic008G072900--Sobic003G029900 Sobic006G097300 Sobic006G097300 Sobic008G072900--Sobic006G097300 Sobic007G193300 Sobic007G193300 Sobic008G072900--Sobic007G193300 Sobic002G239000 Sobic002G239000 Sobic008G072900--Sobic002G239000 Sobic008G072900--Sobic001G171100 Sobic008G072900--Sobic003G022900 Sobic010G067200--Sobic005G164800 Sobic010G067200--Sobic008G072900 Sobic010G067200--Sobic003G029900 Sobic010G067200--Sobic001G377600 Sobic010G067200--Sobic004G294600 Sobic010G067200--Sobic001G171100 Sobic010G067200--Sobic003G027200 Sobic003G217300 Sobic003G217300 Sobic010G067200--Sobic003G217300 Sobic004G218000 Sobic004G218000 Sobic010G067200--Sobic004G218000 Sobic006G064700 Sobic006G064700 Sobic008G176300--Sobic006G064700 Sobic009G039900 Sobic009G039900 Sobic008G176300--Sobic009G039900 Sobic009G039100 Sobic009G039100 Sobic008G176300--Sobic009G039100 Sobic005G148600 Sobic005G148600 Sobic008G176300--Sobic005G148600 Sobic008G176300--Sobic007G128400 Sobic008G176300--Sobic006G117300 Sobic005G090500 Sobic005G090500 Sobic008G176300--Sobic005G090500 Sobic005G153400 Sobic005G153400 Sobic008G176300--Sobic005G153400 Sobic005G074800 Sobic005G074800 Sobic008G176300--Sobic005G074800 Sobic010G212700 Sobic010G212700 Sobic001G171100--Sobic010G212700 Sobic001G171100--Sobic003G022900 Sobic001G171100--Sobic001G377600 Sobic001G171100--Sobic008G072900 Sobic001G171100--Sobic003G027200 Sobic001G171100--Sobic005G164800 Sobic001G171100--Sobic003G029900 Sobic001G171200 Sobic001G171200 Sobic001G171100--Sobic001G171200 Sobic001G171100--Sobic006G097300 Sobic003G027200--Sobic008G072900 Sobic003G027200--Sobic003G381100 Sobic003G027200--Sobic001G377600 Sobic003G027200--Sobic003G029900 Sobic010G118900 Sobic010G118900 Sobic003G027200--Sobic010G118900 Sobic003G027200--Sobic006G097300 Sobic001G287900 Sobic001G287900 Sobic003G027200--Sobic001G287900 Sobic003G027200--Sobic007G193300 Sobic003G027200--Sobic002G239000
Octagon: transcription factors


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