Gene annotation
Transcriptome id Sobic.004G300600.1
Synonym Sb04g033400
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XS36
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF73
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G33260 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g43290.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020937 , Zm00025a006315 , Zm00025a010389 , Zm00025a032161
Brachypodium KQK00546 , KQJ83840 , KQK24034 , KQK24035
Barley HORVU6Hr1G061280.3 , HORVU6Hr1G061280.2 , HORVU6Hr1G061280.1 , HORVU6Hr1G061280.4 , HORVU1Hr1G047010.1 , HORVU4Hr1G051120.43 , HORVU6Hr1G094680.3 , HORVU6Hr1G094680.2
Wheat TraesCS6B02G284500 , TraesCS1A02G177000 , TraesCS7D02G010800 , TraesCS6D02G402600 , TraesCS1B02G203200 , TraesCS6A02G240100 , TraesCS6D02G222400 , TraesCS1D02G175400 , TraesCS2B02G407100
Populus -


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cDNA sequences
Sobic.004G300600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G121200 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G107900 bZIP transcription factor family protein, putative, expressed -
3 Sobic.009G008300 expressed protein -
4 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.009G081400 expressed protein -
6 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.004G312700 expressed protein -
8 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
9 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.002G085900 expressed protein -
11 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
12 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G005000 receptor protein kinase, putative, expressed -
14 Sobic.004G279601 - K11254: histone H4
15 Sobic.003G257900 auxin-responsive protein, putative, expressed -
16 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.002G244300 fasciclin domain containing protein, expressed -
18 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
19 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
20 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T


Gene co-expression network
sample Sobic004G300600 Sobic004G300600 Sobic004G121200 Sobic004G121200 Sobic004G300600--Sobic004G121200 Sobic004G107900 Sobic004G107900 Sobic004G300600--Sobic004G107900 Sobic009G008300 Sobic009G008300 Sobic004G300600--Sobic009G008300 Sobic007G192300 Sobic007G192300 Sobic004G300600--Sobic007G192300 Sobic009G081400 Sobic009G081400 Sobic004G300600--Sobic009G081400 Sobic004G249700 Sobic004G249700 Sobic004G300600--Sobic004G249700 Sobic004G312700 Sobic004G312700 Sobic004G300600--Sobic004G312700 Sobic001G462100 Sobic001G462100 Sobic004G300600--Sobic001G462100 Sobic001G239400 Sobic001G239400 Sobic004G300600--Sobic001G239400 Sobic003G000100 Sobic003G000100 Sobic004G121200--Sobic003G000100 Sobic004G322100 Sobic004G322100 Sobic004G121200--Sobic004G322100 Sobic007G158800 Sobic007G158800 Sobic004G121200--Sobic007G158800 Sobic008G016000 Sobic008G016000 Sobic004G121200--Sobic008G016000 Sobic006G089000 Sobic006G089000 Sobic004G121200--Sobic006G089000 Sobic003G140700 Sobic003G140700 Sobic004G121200--Sobic003G140700 Sobic006G003100 Sobic006G003100 Sobic004G121200--Sobic006G003100 Sobic002G183700 Sobic002G183700 Sobic004G121200--Sobic002G183700 Sobic010G152400 Sobic010G152400 Sobic004G121200--Sobic010G152400 Sobic006G018900 Sobic006G018900 Sobic004G107900--Sobic006G018900 Sobic004G107900--Sobic001G462100 Sobic001G005000 Sobic001G005000 Sobic004G107900--Sobic001G005000 Sobic004G107900--Sobic004G249700 Sobic010G014300 Sobic010G014300 Sobic004G107900--Sobic010G014300 Sobic001G397700 Sobic001G397700 Sobic004G107900--Sobic001G397700 Sobic004G107900--Sobic001G239400 Sobic006G166700 Sobic006G166700 Sobic004G107900--Sobic006G166700 Sobic004G107900--Sobic004G300600 Sobic002G245900 Sobic002G245900 Sobic009G008300--Sobic002G245900 Sobic007G133600 Sobic007G133600 Sobic009G008300--Sobic007G133600 Sobic003G057600 Sobic003G057600 Sobic009G008300--Sobic003G057600 Sobic009G008300--Sobic004G249700 Sobic009G008300--Sobic001G239400 Sobic001G076800 Sobic001G076800 Sobic009G008300--Sobic001G076800 Sobic004G042700 Sobic004G042700 Sobic009G008300--Sobic004G042700 Sobic002G032900 Sobic002G032900 Sobic009G008300--Sobic002G032900 Sobic001G395800 Sobic001G395800 Sobic009G008300--Sobic001G395800 Sobic003G160700 Sobic003G160700 Sobic007G192300--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic007G192300--Sobic001G322200 Sobic009G248500 Sobic009G248500 Sobic007G192300--Sobic009G248500 Sobic003G037800 Sobic003G037800 Sobic007G192300--Sobic003G037800 Sobic002G393400 Sobic002G393400 Sobic007G192300--Sobic002G393400 Sobic003G078200 Sobic003G078200 Sobic007G192300--Sobic003G078200 Sobic003G228900 Sobic003G228900 Sobic007G192300--Sobic003G228900 Sobic004G345500 Sobic004G345500 Sobic007G192300--Sobic004G345500 Sobic009G027900 Sobic009G027900 Sobic007G192300--Sobic009G027900 Sobic001G070200 Sobic001G070200 Sobic009G081400--Sobic001G070200 Sobic004G198200 Sobic004G198200 Sobic009G081400--Sobic004G198200 Sobic004G133000 Sobic004G133000 Sobic009G081400--Sobic004G133000 Sobic007G130000 Sobic007G130000 Sobic009G081400--Sobic007G130000 Sobic009G081400--Sobic004G107900 Sobic009G081400--Sobic004G300600 Sobic008G020500 Sobic008G020500 Sobic009G081400--Sobic008G020500 Sobic006G176400 Sobic006G176400 Sobic009G081400--Sobic006G176400 Sobic009G081400--Sobic004G312700 Sobic004G249700--Sobic001G239400 Sobic004G249700--Sobic001G005000 Sobic010G194500 Sobic010G194500 Sobic004G249700--Sobic010G194500 Sobic004G249700--Sobic009G008300 Sobic004G249700--Sobic007G133600 Sobic009G076800 Sobic009G076800 Sobic004G249700--Sobic009G076800 Sobic004G249700--Sobic006G166700 Sobic004G249700--Sobic004G107900 Sobic004G249700--Sobic006G018900 Sobic004G312700--Sobic004G198200 Sobic004G312700--Sobic004G300600 Sobic004G168800 Sobic004G168800 Sobic004G312700--Sobic004G168800 Sobic004G312700--Sobic009G081400 Sobic004G312700--Sobic007G130000 Sobic001G427400 Sobic001G427400 Sobic004G312700--Sobic001G427400 Sobic004G312700--Sobic001G070200 Sobic009G190400 Sobic009G190400 Sobic004G312700--Sobic009G190400 Sobic003G414400 Sobic003G414400 Sobic004G312700--Sobic003G414400 Sobic001G462100--Sobic001G005000 Sobic001G462100--Sobic006G018900 Sobic001G462100--Sobic004G107900 Sobic001G462100--Sobic006G166700 Sobic001G462100--Sobic010G014300 Sobic001G462100--Sobic010G194500 Sobic007G206700 Sobic007G206700 Sobic001G462100--Sobic007G206700 Sobic001G462100--Sobic009G190400 Sobic001G462100--Sobic009G076800 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic004G288400 Sobic004G288400 Sobic001G239400--Sobic004G288400 Sobic001G239400--Sobic009G008300 Sobic001G239400--Sobic009G076800 Sobic001G239400--Sobic010G194500 Sobic006G003000 Sobic006G003000 Sobic001G239400--Sobic006G003000
Octagon: transcription factors


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