Gene annotation
Transcriptome id Sobic.004G121200.1
Synonym Sb04g010100
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XZN4
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF237
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os06g06290.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a037597 , Zm00025a019854 , Zm00025a041574 , Zm00025a041578 , Zm00025a043264 , Zm00025a049983 , Zm00025a049986
Brachypodium KQK19535
Barley HORVU1Hr1G066090.1 , HORVU1Hr1G066090.2 , HORVU1Hr1G066090.3 , HORVU1Hr1G066090.4 , HORVU7Hr1G024670.1 , HORVU1Hr1G029460.1 , HORVU1Hr1G029460.2 , HORVU1Hr1G029460.3 , HORVU1Hr1G029460.4 , HORVU3Hr1G116910.1 , HORVU0Hr1G031170.2 , HORVU0Hr1G031170.3 , HORVU0Hr1G031170.4 , HORVU0Hr1G031170.5 , HORVU7Hr1G024220.3 , HORVU7Hr1G024220.2 , HORVU7Hr1G024220.7 , HORVU7Hr1G024220.4 , HORVU7Hr1G024670.4 , HORVU2Hr1G002420.1 , HORVU7Hr1G024670.3 , HORVU1Hr1G084390.12 , HORVU1Hr1G084390.11 , HORVU1Hr1G084390.10 , HORVU1Hr1G084390.3 , HORVU1Hr1G084390.2 , HORVU1Hr1G084390.1 , HORVU1Hr1G084390.7 , HORVU1Hr1G084390.6 , HORVU1Hr1G084390.5 , HORVU1Hr1G084390.4 , HORVU1Hr1G084390.9 , HORVU1Hr1G084390.8 , HORVU7Hr1G024670.2 , HORVU7Hr1G024220.8 , HORVU7Hr1G024220.6 , HORVU7Hr1G024220.5
Wheat TraesCS7B02G013200 , TraesCS3D02G146300 , TraesCS1A02G382200 , TraesCS1B02G333800 , TraesCS1B02G145300 , TraesCS1D02G127400 , TraesCS6A02G051500 , TraesCS7D02G108900 , TraesCSU02G095400 , TraesCSU02G158200 , TraesCS3A02G535400 , TraesCS1D02G390000 , TraesCS3A02G140800 , TraesCS7D02G111800 , TraesCS3B02G163800 , TraesCSU02G110500 , TraesCS7A02G115300 , TraesCS1D02G321300 , TraesCS3D02G541000 , TraesCS1A02G126100 , TraesCS7A02G113600 , TraesCSU02G168000 , TraesCS3B02G608400 , TraesCS1B02G407300 , TraesCS1A02G321100 , TraesCS6B02G068700 , TraesCS1D02G389900 , TraesCS1B02G407500
Populus -


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cDNA sequences
Sobic.004G121200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
2 Sobic.004G322100 hypro1, putative, expressed -
3 Sobic.007G158800 patatin, putative, expressed -
4 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
5 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.003G140700 peroxidase precursor, putative, expressed -
7 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
8 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
9 Sobic.010G152400 glycosyltransferase, putative, expressed -
10 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
11 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
12 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
13 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
14 Sobic.004G271800 WRKY66, expressed -
15 Sobic.004G306900 amino acid transporter, putative, expressed -
16 Sobic.001G438200 expressed protein -
17 Sobic.010G212500 - -
18 Sobic.004G110700 DNA binding protein, putative, expressed -
19 Sobic.002G228800 expressed protein -
20 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase


Gene co-expression network
sample Sobic004G121200 Sobic004G121200 Sobic003G000100 Sobic003G000100 Sobic004G121200--Sobic003G000100 Sobic004G322100 Sobic004G322100 Sobic004G121200--Sobic004G322100 Sobic007G158800 Sobic007G158800 Sobic004G121200--Sobic007G158800 Sobic008G016000 Sobic008G016000 Sobic004G121200--Sobic008G016000 Sobic006G089000 Sobic006G089000 Sobic004G121200--Sobic006G089000 Sobic003G140700 Sobic003G140700 Sobic004G121200--Sobic003G140700 Sobic006G003100 Sobic006G003100 Sobic004G121200--Sobic006G003100 Sobic002G183700 Sobic002G183700 Sobic004G121200--Sobic002G183700 Sobic010G152400 Sobic010G152400 Sobic004G121200--Sobic010G152400 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic004G306900 Sobic004G306900 Sobic003G000100--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic003G000100--Sobic006G092700 Sobic004G106100 Sobic004G106100 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700 Sobic001G502000 Sobic001G502000 Sobic007G158800--Sobic001G502000 Sobic001G229000 Sobic001G229000 Sobic007G158800--Sobic001G229000 Sobic007G158800--Sobic002G183700 Sobic007G158800--Sobic006G089000 Sobic005G222500 Sobic005G222500 Sobic007G158800--Sobic005G222500 Sobic007G158800--Sobic004G029100 Sobic007G158800--Sobic003G000100 Sobic007G158800--Sobic006G003100 Sobic007G158800--Sobic007G086300 Sobic002G326500 Sobic002G326500 Sobic008G016000--Sobic002G326500 Sobic008G016000--Sobic004G322100 Sobic008G016000--Sobic003G000100 Sobic008G016000--Sobic004G271800 Sobic003G399600 Sobic003G399600 Sobic008G016000--Sobic003G399600 Sobic008G016000--Sobic002G183700 Sobic008G016000--Sobic004G110700 Sobic008G016000--Sobic003G140700 Sobic009G150500 Sobic009G150500 Sobic008G016000--Sobic009G150500 Sobic006G089000--Sobic007G158800 Sobic006G089000--Sobic001G502000 Sobic006G089000--Sobic002G183700 Sobic001G379400 Sobic001G379400 Sobic006G089000--Sobic001G379400 Sobic001G261509 Sobic001G261509 Sobic006G089000--Sobic001G261509 Sobic004G297900 Sobic004G297900 Sobic006G089000--Sobic004G297900 Sobic006G089000--Sobic001G229000 Sobic006G089000--Sobic004G322100 Sobic001G238300 Sobic001G238300 Sobic006G089000--Sobic001G238300 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic002G255000 Sobic002G255000 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic006G003100--Sobic003G000100 Sobic006G003100--Sobic010G152400 Sobic010G031700 Sobic010G031700 Sobic006G003100--Sobic010G031700 Sobic006G003100--Sobic004G106100 Sobic006G003100--Sobic007G086300 Sobic002G233200 Sobic002G233200 Sobic006G003100--Sobic002G233200 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic006G003100--Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic010G152400--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic010G152400--Sobic010G082000 Sobic010G152400--Sobic006G003100 Sobic010G152400--Sobic004G106100 Sobic010G152400--Sobic006G019700
Octagon: transcription factors


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