Gene annotation
Transcriptome id Sobic.003G257900.1
Synonym Sb03g031230
Functional annotation auxin-responsive protein, putative, expressed
UniProt C5XGR2
Pfam PF03188
Panther DB PTHR23130 PTHR23130:SF86
NCBI CDD KOG4293; Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G61750 : Cytochrome b561/ferric reductase transmembrane with DOMON related domain
RAP-DB (Rice) LOC_Os01g48850.1 : auxin-responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a036559 , Zm00025a028031
Brachypodium PNT70742 , KQK09200 , KQK04968 , KQK09199
Barley HORVU1Hr1G085050.6 , HORVU1Hr1G085050.1 , HORVU1Hr1G085050.8 , HORVU3Hr1G062870.4 , HORVU3Hr1G062870.5 , HORVU3Hr1G062870.6 , HORVU3Hr1G062870.7 , HORVU3Hr1G062870.1 , HORVU3Hr1G062870.2 , HORVU3Hr1G062870.3 , HORVU1Hr1G085050.7 , HORVU1Hr1G085050.5 , HORVU1Hr1G085050.4 , HORVU1Hr1G085050.3 , HORVU1Hr1G085050.2 , HORVU1Hr1G085050.9 , HORVU1Hr1G085050.11 , HORVU1Hr1G085050.10
Wheat TraesCS1B02G412100 , TraesCS3B02G300400 , TraesCS3B02G300400 , TraesCS3D02G267100 , TraesCS3A02G266900 , TraesCS1D02G393600 , TraesCS1A02G385600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G282300 - -
2 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
3 Sobic.005G088300 expressed protein -
4 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.001G008900 - -
6 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.001G531300 glycosyl hydrolases family 16 protein, protein, expressed -
8 Sobic.008G055100 dirigent, putative, expressed -
9 Sobic.010G138300 DUF617 domain containing protein, expressed -
10 Sobic.008G102800 expressed protein -
11 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
12 Sobic.003G121000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G522700 no apical meristem protein, putative, expressed -
15 Sobic.008G135300 thaumatin family domain containing protein, expressed -
16 Sobic.001G455100 expressed protein -
17 Sobic.004G119600 expansin precursor, putative, expressed -
18 Sobic.004G121200 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
20 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic003G257900 Sobic003G257900 Sobic006G282300 Sobic006G282300 Sobic003G257900--Sobic006G282300 Sobic003G307400 Sobic003G307400 Sobic003G257900--Sobic003G307400 Sobic005G088300 Sobic005G088300 Sobic003G257900--Sobic005G088300 Sobic010G083400 Sobic010G083400 Sobic003G257900--Sobic010G083400 Sobic001G008900 Sobic001G008900 Sobic003G257900--Sobic001G008900 Sobic002G094600 Sobic002G094600 Sobic003G257900--Sobic002G094600 Sobic001G531300 Sobic001G531300 Sobic003G257900--Sobic001G531300 Sobic008G055100 Sobic008G055100 Sobic003G257900--Sobic008G055100 Sobic010G138300 Sobic010G138300 Sobic003G257900--Sobic010G138300 Sobic002G365550 Sobic002G365550 Sobic006G282300--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic006G282300--Sobic004G071000 Sobic002G365801 Sobic002G365801 Sobic006G282300--Sobic002G365801 Sobic006G028400 Sobic006G028400 Sobic006G282300--Sobic006G028400 Sobic006G282300--Sobic008G055100 Sobic010G096400 Sobic010G096400 Sobic006G282300--Sobic010G096400 Sobic010G212500 Sobic010G212500 Sobic006G282300--Sobic010G212500 Sobic003G119500 Sobic003G119500 Sobic006G282300--Sobic003G119500 Sobic007G178900 Sobic007G178900 Sobic006G282300--Sobic007G178900 Sobic003G307400--Sobic010G138300 Sobic001G514200 Sobic001G514200 Sobic003G307400--Sobic001G514200 Sobic003G121000 Sobic003G121000 Sobic003G307400--Sobic003G121000 Sobic006G119000 Sobic006G119000 Sobic003G307400--Sobic006G119000 Sobic008G135300 Sobic008G135300 Sobic003G307400--Sobic008G135300 Sobic003G034600 Sobic003G034600 Sobic003G307400--Sobic003G034600 Sobic001G522700 Sobic001G522700 Sobic003G307400--Sobic001G522700 Sobic001G295800 Sobic001G295800 Sobic003G307400--Sobic001G295800 Sobic008G102800 Sobic008G102800 Sobic003G307400--Sobic008G102800 Sobic001G261460 Sobic001G261460 Sobic005G088300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic005G088300--Sobic010G047600 Sobic005G088300--Sobic003G121000 Sobic008G005100 Sobic008G005100 Sobic005G088300--Sobic008G005100 Sobic005G088300--Sobic001G514200 Sobic005G088300--Sobic008G055100 Sobic005G088300--Sobic010G096400 Sobic001G046800 Sobic001G046800 Sobic005G088300--Sobic001G046800 Sobic005G088300--Sobic008G135300 Sobic002G244300 Sobic002G244300 Sobic010G083400--Sobic002G244300 Sobic002G368300 Sobic002G368300 Sobic010G083400--Sobic002G368300 Sobic002G154600 Sobic002G154600 Sobic010G083400--Sobic002G154600 Sobic009G088900 Sobic009G088900 Sobic010G083400--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic010G083400--Sobic007G159450 Sobic010G083400--Sobic002G365801 Sobic010G083400--Sobic008G055100 Sobic010G083400--Sobic004G071000 Sobic003G121100 Sobic003G121100 Sobic010G083400--Sobic003G121100 Sobic003G100900 Sobic003G100900 Sobic001G008900--Sobic003G100900 Sobic001G008900--Sobic006G282300 Sobic010G180100 Sobic010G180100 Sobic001G008900--Sobic010G180100 Sobic005G096101 Sobic005G096101 Sobic001G008900--Sobic005G096101 Sobic001G008900--Sobic002G094600 Sobic002G254900 Sobic002G254900 Sobic001G008900--Sobic002G254900 Sobic010G101900 Sobic010G101900 Sobic001G008900--Sobic010G101900 Sobic001G002800 Sobic001G002800 Sobic001G008900--Sobic001G002800 Sobic002G252000 Sobic002G252000 Sobic001G008900--Sobic002G252000 Sobic004G165300 Sobic004G165300 Sobic002G094600--Sobic004G165300 Sobic001G471800 Sobic001G471800 Sobic002G094600--Sobic001G471800 Sobic003G236600 Sobic003G236600 Sobic002G094600--Sobic003G236600 Sobic003G183300 Sobic003G183300 Sobic002G094600--Sobic003G183300 Sobic009G008800 Sobic009G008800 Sobic002G094600--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic002G094600--Sobic001G484000 Sobic004G193500 Sobic004G193500 Sobic002G094600--Sobic004G193500 Sobic002G146000 Sobic002G146000 Sobic002G094600--Sobic002G146000 Sobic002G094600--Sobic006G282300 Sobic001G156500 Sobic001G156500 Sobic001G531300--Sobic001G156500 Sobic001G531300--Sobic003G121000 Sobic001G531300--Sobic003G307400 Sobic002G219400 Sobic002G219400 Sobic001G531300--Sobic002G219400 Sobic002G251100 Sobic002G251100 Sobic001G531300--Sobic002G251100 Sobic003G408900 Sobic003G408900 Sobic001G531300--Sobic003G408900 Sobic001G531300--Sobic010G138300 Sobic009G232100 Sobic009G232100 Sobic001G531300--Sobic009G232100 Sobic003G345700 Sobic003G345700 Sobic001G531300--Sobic003G345700 Sobic008G055100--Sobic009G088900 Sobic008G055100--Sobic001G514200 Sobic009G109000 Sobic009G109000 Sobic008G055100--Sobic009G109000 Sobic007G218800 Sobic007G218800 Sobic008G055100--Sobic007G218800 Sobic008G055100--Sobic010G096400 Sobic001G049900 Sobic001G049900 Sobic008G055100--Sobic001G049900 Sobic007G176000 Sobic007G176000 Sobic008G055100--Sobic007G176000 Sobic008G055100--Sobic007G178900 Sobic008G055100--Sobic002G154600 Sobic010G138300--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic010G138300--Sobic009G199001 Sobic010G138300--Sobic008G102800 Sobic009G221500 Sobic009G221500 Sobic010G138300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G138300--Sobic001G245800 Sobic009G074500 Sobic009G074500 Sobic010G138300--Sobic009G074500 Sobic003G340100 Sobic003G340100 Sobic010G138300--Sobic003G340100 Sobic007G050200 Sobic007G050200 Sobic010G138300--Sobic007G050200 Sobic006G227500 Sobic006G227500 Sobic010G138300--Sobic006G227500
Octagon: transcription factors


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