Gene annotation
Transcriptome id Sobic.001G522700.1,Sobic.001G522700.2
Synonym VND1, ANAC037, Sb01g048730
Functional annotation no apical meristem protein, putative, expressed
UniProt C5X004
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G18060 : vascular related NAC-domain protein 1
RAP-DB (Rice) LOC_Os03g03540.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a053477 , Zm00025a010559 , Zm00025a030670 , Zm00025a056131 , Zm00025a032141 , Zm00025a050329 , Zm00025a010699 , Zm00025a000360
Brachypodium KQJ94778 , KQK00031 , KQK00032 , KQK00033 , KQJ95318 , KQJ94263 , KQJ94262 , PNT68893 , KQK10307 , PNT78278 , PNT66495 , KQK23882
Barley HORVU7Hr1G070780.9 , HORVU7Hr1G070780.8 , HORVU7Hr1G070780.5 , HORVU7Hr1G070780.4 , HORVU7Hr1G070780.7 , HORVU7Hr1G070780.6 , HORVU7Hr1G070780.1 , HORVU7Hr1G070780.3 , HORVU7Hr1G070780.2 , HORVU3Hr1G080100.4 , HORVU3Hr1G080100.5 , HORVU3Hr1G080100.6 , HORVU3Hr1G080100.7 , HORVU3Hr1G080100.3 , HORVU3Hr1G094170.1 , HORVU6Hr1G060800.2 , HORVU6Hr1G060800.3 , HORVU6Hr1G060800.1 , HORVU6Hr1G060800.6 , HORVU6Hr1G060800.7 , HORVU6Hr1G060800.4 , HORVU6Hr1G060800.5 , HORVU2Hr1G089210.6 , HORVU5Hr1G074810.3 , HORVU5Hr1G074810.2 , HORVU5Hr1G074810.1 , HORVU5Hr1G074810.6 , HORVU5Hr1G074810.5 , HORVU5Hr1G074810.4 , HORVU4Hr1G083050.1 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU2Hr1G089210.4 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU7Hr1G070780.10 , HORVU2Hr1G004130.1 , HORVU5Hr1G099460.5 , HORVU5Hr1G099460.4 , HORVU5Hr1G099460.3 , HORVU5Hr1G099460.2 , HORVU5Hr1G099460.1 , HORVU6Hr1G060800.8 , HORVU6Hr1G060800.9 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.5 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.6 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU4Hr1G083050.12 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.10 , HORVU2Hr1G089210.5 , HORVU2Hr1G089210.2 , HORVU2Hr1G089210.3 , HORVU4Hr1G083050.14 , HORVU2Hr1G089210.1 , HORVU4Hr1G089660.1
Wheat TraesCS5B02G275200 , TraesCS7D02G295100 , TraesCS7D02G295100 , TraesCS7D02G295100 , TraesCS7D02G295100 , TraesCS7D02G295100 , TraesCS3A02G339600 , TraesCS3B02G371200 , TraesCS3D02G333100 , TraesCS5A02G143200 , TraesCS5B02G415600 , TraesCS7B02G187600 , TraesCS5B02G415400 , TraesCS2A02G566400 , TraesCS3A02G339600 , TraesCS5D02G148800 , TraesCS5B02G415700 , TraesCS7A02G299600 , TraesCS5A02G491700 , TraesCS4B02G320300 , TraesCS7A02G299600 , TraesCS7A02G299600 , TraesCS7A02G299600 , TraesCS5D02G420800 , TraesCS2D02G576300 , TraesCS7D02G322700 , TraesCS2A02G382400 , TraesCS2A02G382400 , TraesCS4D02G316800 , TraesCS7B02G233300 , TraesCS7B02G094000 , TraesCS7D02G329200 , TraesCS5D02G283200 , TraesCS7A02G349500 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS2A02G566000 , TraesCS7B02G226600 , TraesCS6B02G286200 , TraesCS6B02G286200 , TraesCS5B02G142100 , TraesCS7D02G189900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G455100 expressed protein -
2 Sobic.008G135300 thaumatin family domain containing protein, expressed -
3 Sobic.009G221500 lipid phosphatase protein, putative, expressed -
4 Sobic.007G154200 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
5 Sobic.010G152400 glycosyltransferase, putative, expressed -
6 Sobic.010G138300 DUF617 domain containing protein, expressed -
7 Sobic.008G019800 - -
8 Sobic.010G148800 WRKY31, expressed -
9 Sobic.006G201000 WRKY37, expressed -
10 Sobic.003G020200 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.009G074500 expressed protein -
12 Sobic.008G102800 expressed protein -
13 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
14 Sobic.004G322100 hypro1, putative, expressed -
15 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
16 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
17 Sobic.001G245800 expressed protein -
18 Sobic.003G128800 expansin precursor, putative, expressed -
19 Sobic.008G099100 expressed protein -
20 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic001G522700 Sobic001G522700 Sobic001G455100 Sobic001G455100 Sobic001G522700--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic001G522700--Sobic008G135300 Sobic009G221500 Sobic009G221500 Sobic001G522700--Sobic009G221500 Sobic007G154200 Sobic007G154200 Sobic001G522700--Sobic007G154200 Sobic010G152400 Sobic010G152400 Sobic001G522700--Sobic010G152400 Sobic010G138300 Sobic010G138300 Sobic001G522700--Sobic010G138300 Sobic008G019800 Sobic008G019800 Sobic001G522700--Sobic008G019800 Sobic010G148800 Sobic010G148800 Sobic001G522700--Sobic010G148800 Sobic006G201000 Sobic006G201000 Sobic001G522700--Sobic006G201000 Sobic001G455100--Sobic007G154200 Sobic008G099100 Sobic008G099100 Sobic001G455100--Sobic008G099100 Sobic001G455100--Sobic008G135300 Sobic001G455100--Sobic010G148800 Sobic001G455100--Sobic001G522700 Sobic003G322100 Sobic003G322100 Sobic001G455100--Sobic003G322100 Sobic002G365550 Sobic002G365550 Sobic001G455100--Sobic002G365550 Sobic010G096400 Sobic010G096400 Sobic001G455100--Sobic010G096400 Sobic001G455100--Sobic009G221500 Sobic003G183300 Sobic003G183300 Sobic008G135300--Sobic003G183300 Sobic008G135300--Sobic001G455100 Sobic008G135300--Sobic008G099100 Sobic003G121000 Sobic003G121000 Sobic008G135300--Sobic003G121000 Sobic008G135300--Sobic006G201000 Sobic008G135300--Sobic001G522700 Sobic008G135300--Sobic007G154200 Sobic006G003100 Sobic006G003100 Sobic008G135300--Sobic006G003100 Sobic008G102800 Sobic008G102800 Sobic008G135300--Sobic008G102800 Sobic007G050200 Sobic007G050200 Sobic009G221500--Sobic007G050200 Sobic006G256900 Sobic006G256900 Sobic009G221500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic009G221500--Sobic009G219200 Sobic004G322100 Sobic004G322100 Sobic009G221500--Sobic004G322100 Sobic009G221500--Sobic010G148800 Sobic009G199001 Sobic009G199001 Sobic009G221500--Sobic009G199001 Sobic004G323300 Sobic004G323300 Sobic009G221500--Sobic004G323300 Sobic001G438200 Sobic001G438200 Sobic009G221500--Sobic001G438200 Sobic001G430100 Sobic001G430100 Sobic009G221500--Sobic001G430100 Sobic007G154200--Sobic001G455100 Sobic007G154200--Sobic006G003100 Sobic007G154200--Sobic008G099100 Sobic007G154200--Sobic003G322100 Sobic009G074500 Sobic009G074500 Sobic007G154200--Sobic009G074500 Sobic010G031700 Sobic010G031700 Sobic007G154200--Sobic010G031700 Sobic007G154200--Sobic008G135300 Sobic006G079300 Sobic006G079300 Sobic007G154200--Sobic006G079300 Sobic003G020200 Sobic003G020200 Sobic007G154200--Sobic003G020200 Sobic003G000100 Sobic003G000100 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic003G240400 Sobic003G240400 Sobic010G152400--Sobic003G240400 Sobic004G306900 Sobic004G306900 Sobic010G152400--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic010G152400--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic010G152400--Sobic010G082000 Sobic010G152400--Sobic006G003100 Sobic004G106100 Sobic004G106100 Sobic010G152400--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic010G152400--Sobic006G019700 Sobic001G514200 Sobic001G514200 Sobic010G138300--Sobic001G514200 Sobic010G138300--Sobic009G199001 Sobic010G138300--Sobic008G102800 Sobic010G138300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G138300--Sobic001G245800 Sobic010G138300--Sobic009G074500 Sobic003G340100 Sobic003G340100 Sobic010G138300--Sobic003G340100 Sobic010G138300--Sobic007G050200 Sobic006G227500 Sobic006G227500 Sobic010G138300--Sobic006G227500 Sobic001G229000 Sobic001G229000 Sobic008G019800--Sobic001G229000 Sobic008G019800--Sobic001G438200 Sobic008G019800--Sobic010G152400 Sobic004G029100 Sobic004G029100 Sobic008G019800--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic008G019800--Sobic001G502000 Sobic008G019800--Sobic004G322100 Sobic007G158800 Sobic007G158800 Sobic008G019800--Sobic007G158800 Sobic002G183700 Sobic002G183700 Sobic008G019800--Sobic002G183700 Sobic008G019800--Sobic004G306900 Sobic005G065900 Sobic005G065900 Sobic010G148800--Sobic005G065900 Sobic004G322800 Sobic004G322800 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic005G066432 Sobic005G066432 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic010G148800--Sobic002G404100 Sobic002G042200 Sobic002G042200 Sobic010G148800--Sobic002G042200 Sobic010G148800--Sobic009G219200 Sobic010G148800--Sobic006G079300 Sobic004G271800 Sobic004G271800 Sobic006G201000--Sobic004G271800 Sobic006G201000--Sobic003G183300 Sobic008G035800 Sobic008G035800 Sobic006G201000--Sobic008G035800 Sobic006G201000--Sobic010G082000 Sobic006G201000--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic006G201000--Sobic006G135300 Sobic004G322000 Sobic004G322000 Sobic006G201000--Sobic004G322000 Sobic007G090600 Sobic007G090600 Sobic006G201000--Sobic007G090600 Sobic006G201000--Sobic003G240400
Octagon: transcription factors


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