Gene annotation
Transcriptome id Sobic.005G065300.2,Sobic.005G065300.1
Synonym Sb05g005510
Functional annotation methyltransferase, putative, expressed
UniProt C5Y695 , A0A1Z5RH81
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF926 PTHR10108 PTHR10108:SF784
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G64030 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os11g08314.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a037777 , Zm00025a041736 , Zm00025a021496 , Zm00025a025710 , Zm00025a003591 , Zm00025a012764 , Zm00025a032303
Brachypodium KQJ89118 , PNT65355 , KQJ92009 , KQJ87914 , KQK00747
Barley HORVU5Hr1G037320.7 , HORVU4Hr1G017470.3 , HORVU4Hr1G017470.2 , HORVU4Hr1G017470.1 , HORVU4Hr1G017470.7 , HORVU4Hr1G017470.6 , HORVU4Hr1G017470.5 , HORVU4Hr1G017470.4 , HORVU6Hr1G065360.1 , HORVU1Hr1G051470.9 , HORVU1Hr1G051470.1 , HORVU1Hr1G051470.2 , HORVU1Hr1G051470.3 , HORVU1Hr1G051470.4 , HORVU1Hr1G051470.5 , HORVU1Hr1G051470.6 , HORVU1Hr1G051470.7 , HORVU0Hr1G021970.3 , HORVU0Hr1G021970.2 , HORVU0Hr1G021970.1 , HORVU0Hr1G021970.7 , HORVU0Hr1G021970.6 , HORVU0Hr1G021970.5 , HORVU0Hr1G021970.4 , HORVU0Hr1G021970.9 , HORVU0Hr1G021970.8 , HORVU6Hr1G065360.5 , HORVU4Hr1G033650.3 , HORVU4Hr1G033650.2 , HORVU4Hr1G033650.4 , HORVU5Hr1G037320.5 , HORVU5Hr1G037320.6 , HORVU2Hr1G095070.2 , HORVU2Hr1G095070.1 , HORVU4Hr1G033650.11 , HORVU4Hr1G033650.10 , HORVU4Hr1G033650.13 , HORVU4Hr1G033650.12 , HORVU2Hr1G127220.1 , HORVU2Hr1G127220.2 , HORVU2Hr1G127220.3 , HORVU2Hr1G127220.4 , HORVU6Hr1G065360.12 , HORVU6Hr1G065360.11 , HORVU6Hr1G065360.14 , HORVU6Hr1G065360.15 , HORVU6Hr1G065360.4 , HORVU6Hr1G065360.7 , HORVU4Hr1G033650.9 , HORVU4Hr1G033650.8 , HORVU6Hr1G065360.2 , HORVU6Hr1G065360.3 , HORVU6Hr1G065360.6
Wheat TraesCS5D02G127100 , TraesCS5B02G120300 , TraesCS1D02G202300 , TraesCS1D02G202300 , TraesCS6A02G256000 , TraesCS1B02G213600 , TraesCS1B02G213600 , TraesCSU02G022400 , TraesCS4D02G150500 , TraesCS4D02G094600 , TraesCS7D02G380100 , TraesCS5A02G114100 , TraesCS4B02G098500 , TraesCS7B02G286500 , TraesCS2A02G560300 , TraesCS4A02G220000 , TraesCS7A02G383700 , TraesCS7A02G383700 , TraesCS6D02G237200 , TraesCS2D02G569900 , TraesCS4B02G125500 , TraesCS2D02G397900 , TraesCS1A02G198600
Populus -


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cDNA sequences
Sobic.005G065300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G089200 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
2 Sobic.007G103000 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
3 Sobic.007G134260 - -
4 Sobic.008G102850 - -
5 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase
7 Sobic.005G122100 expressed protein -
8 Sobic.003G147700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.003G232100 - -
10 Sobic.006G270800 EF hand family protein, putative, expressed -
11 Sobic.005G214700 - -
12 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.009G090400 - -
15 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.010G190500 - -
17 Sobic.009G089000 ATCHX, putative, expressed -
18 Sobic.005G000200 lipase, putative, expressed -
19 Sobic.007G222200 - -
20 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic005G065300 Sobic005G065300 Sobic009G089200 Sobic009G089200 Sobic005G065300--Sobic009G089200 Sobic007G103000 Sobic007G103000 Sobic005G065300--Sobic007G103000 Sobic007G134260 Sobic007G134260 Sobic005G065300--Sobic007G134260 Sobic008G102850 Sobic008G102850 Sobic005G065300--Sobic008G102850 Sobic003G114800 Sobic003G114800 Sobic005G065300--Sobic003G114800 Sobic004G091000 Sobic004G091000 Sobic005G065300--Sobic004G091000 Sobic005G122100 Sobic005G122100 Sobic005G065300--Sobic005G122100 Sobic003G147700 Sobic003G147700 Sobic005G065300--Sobic003G147700 Sobic003G232100 Sobic003G232100 Sobic005G065300--Sobic003G232100 Sobic009G089200--Sobic005G065300 Sobic009G089200--Sobic007G134260 Sobic009G089200--Sobic007G103000 Sobic009G089200--Sobic003G114800 Sobic009G089200--Sobic003G232100 Sobic009G089200--Sobic004G091000 Sobic009G089200--Sobic005G122100 Sobic009G089200--Sobic003G147700 Sobic006G270800 Sobic006G270800 Sobic009G089200--Sobic006G270800 Sobic007G103000--Sobic007G134260 Sobic007G103000--Sobic005G122100 Sobic007G103000--Sobic004G091000 Sobic007G103000--Sobic003G232100 Sobic007G103000--Sobic003G147700 Sobic007G103000--Sobic003G114800 Sobic007G103000--Sobic008G102850 Sobic007G103000--Sobic006G270800 Sobic009G090400 Sobic009G090400 Sobic007G103000--Sobic009G090400 Sobic007G134260--Sobic007G103000 Sobic007G134260--Sobic005G122100 Sobic007G134260--Sobic004G091000 Sobic007G134260--Sobic003G232100 Sobic007G134260--Sobic003G114800 Sobic007G134260--Sobic003G147700 Sobic007G134260--Sobic006G270800 Sobic007G134260--Sobic008G102850 Sobic007G134260--Sobic009G090400 Sobic008G102850--Sobic007G103000 Sobic008G102850--Sobic007G134260 Sobic005G214700 Sobic005G214700 Sobic008G102850--Sobic005G214700 Sobic008G102850--Sobic005G122100 Sobic008G102850--Sobic005G065300 Sobic008G102850--Sobic003G147700 Sobic008G102850--Sobic004G091000 Sobic008G102850--Sobic003G114800 Sobic008G102850--Sobic003G232100 Sobic003G114800--Sobic004G091000 Sobic003G114800--Sobic003G147700 Sobic003G114800--Sobic007G134260 Sobic005G000200 Sobic005G000200 Sobic003G114800--Sobic005G000200 Sobic003G114800--Sobic007G103000 Sobic003G114800--Sobic003G232100 Sobic003G114800--Sobic006G270800 Sobic008G079200 Sobic008G079200 Sobic003G114800--Sobic008G079200 Sobic003G114800--Sobic005G122100 Sobic004G091000--Sobic003G114800 Sobic004G091000--Sobic007G134260 Sobic004G091000--Sobic007G103000 Sobic004G091000--Sobic003G232100 Sobic004G091000--Sobic003G147700 Sobic004G091000--Sobic005G000200 Sobic004G091000--Sobic006G270800 Sobic004G091000--Sobic005G122100 Sobic005G009700 Sobic005G009700 Sobic004G091000--Sobic005G009700 Sobic005G122100--Sobic009G090400 Sobic005G122100--Sobic007G103000 Sobic005G122100--Sobic007G134260 Sobic007G222200 Sobic007G222200 Sobic005G122100--Sobic007G222200 Sobic005G122100--Sobic006G270800 Sobic005G122100--Sobic003G232100 Sobic002G157900 Sobic002G157900 Sobic005G122100--Sobic002G157900 Sobic005G122100--Sobic003G147700 Sobic002G427500 Sobic002G427500 Sobic005G122100--Sobic002G427500 Sobic003G147700--Sobic003G114800 Sobic003G147700--Sobic006G270800 Sobic003G147700--Sobic007G103000 Sobic003G147700--Sobic007G134260 Sobic003G147700--Sobic002G427500 Sobic003G147700--Sobic004G091000 Sobic006G127800 Sobic006G127800 Sobic003G147700--Sobic006G127800 Sobic003G147700--Sobic005G122100 Sobic003G147700--Sobic003G232100 Sobic003G232100--Sobic007G134260 Sobic003G232100--Sobic006G270800 Sobic003G232100--Sobic007G103000 Sobic003G232100--Sobic005G122100 Sobic003G232100--Sobic004G091000 Sobic003G232100--Sobic003G114800 Sobic003G232100--Sobic003G147700 Sobic003G232100--Sobic002G427500 Sobic003G232100--Sobic006G127800
Octagon: transcription factors


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