Gene annotation
Transcriptome id Sobic.005G085800.1
Synonym Sb05g006980
Functional annotation expressed protein
UniProt C5Y7S7
Pfam PF01852
Panther DB PTHR19308 PTHR19308:SF14
NCBI CDD KOG2761; START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT5G49800 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os11g14070.1 : expressed protein
MaizeGDB (Corn) Zm00025a029557
Brachypodium KQJ88766
Barley HORVU4Hr1G015040.1 , HORVU4Hr1G015040.2 , HORVU4Hr1G015040.3 , HORVU4Hr1G015040.4 , HORVU4Hr1G015040.6
Wheat TraesCS4B02G088100 , TraesCS4A02G228100 , TraesCS4D02G085200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G289701 - -
2 Sobic.002G067050 - -
3 Sobic.001G001000 expressed protein -
4 Sobic.008G045232 - -
5 Sobic.005G030200 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.002G191300 expressed protein -
7 Sobic.001G033701 - -
8 Sobic.003G210701 - -
9 Sobic.004G325150 - -
10 Sobic.008G008701 - -
11 Sobic.001G138500 expressed protein -
12 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
13 Sobic.001G045300 ubiquitin family protein, putative, expressed -
14 Sobic.005G207550 - -
15 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
16 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
17 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
18 Sobic.004G090900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
19 Sobic.002G046500 gibberellin 20 oxidase 1-B, putative, expressed -
20 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20


Gene co-expression network
sample Sobic005G085800 Sobic005G085800 Sobic002G289701 Sobic002G289701 Sobic005G085800--Sobic002G289701 Sobic002G067050 Sobic002G067050 Sobic005G085800--Sobic002G067050 Sobic001G001000 Sobic001G001000 Sobic005G085800--Sobic001G001000 Sobic008G045232 Sobic008G045232 Sobic005G085800--Sobic008G045232 Sobic005G030200 Sobic005G030200 Sobic005G085800--Sobic005G030200 Sobic002G191300 Sobic002G191300 Sobic005G085800--Sobic002G191300 Sobic001G033701 Sobic001G033701 Sobic005G085800--Sobic001G033701 Sobic003G210701 Sobic003G210701 Sobic005G085800--Sobic003G210701 Sobic004G325150 Sobic004G325150 Sobic005G085800--Sobic004G325150 Sobic002G289701--Sobic008G045232 Sobic002G289701--Sobic002G191300 Sobic002G289701--Sobic005G030200 Sobic001G189800 Sobic001G189800 Sobic002G289701--Sobic001G189800 Sobic003G190701 Sobic003G190701 Sobic002G289701--Sobic003G190701 Sobic009G125700 Sobic009G125700 Sobic002G289701--Sobic009G125700 Sobic008G045100 Sobic008G045100 Sobic002G289701--Sobic008G045100 Sobic001G234700 Sobic001G234700 Sobic002G289701--Sobic001G234700 Sobic002G067050--Sobic001G033701 Sobic001G138500 Sobic001G138500 Sobic002G067050--Sobic001G138500 Sobic005G207550 Sobic005G207550 Sobic002G067050--Sobic005G207550 Sobic008G008701 Sobic008G008701 Sobic002G067050--Sobic008G008701 Sobic004G122700 Sobic004G122700 Sobic002G067050--Sobic004G122700 Sobic001G045300 Sobic001G045300 Sobic002G067050--Sobic001G045300 Sobic007G027400 Sobic007G027400 Sobic002G067050--Sobic007G027400 Sobic002G067050--Sobic003G210701 Sobic004G090900 Sobic004G090900 Sobic002G067050--Sobic004G090900 Sobic001G001000--Sobic001G033701 Sobic001G001000--Sobic001G138500 Sobic001G001000--Sobic008G008701 Sobic001G001000--Sobic001G045300 Sobic001G001000--Sobic007G027400 Sobic001G001000--Sobic005G207550 Sobic001G001000--Sobic008G045100 Sobic001G001000--Sobic003G210701 Sobic001G001000--Sobic004G122700 Sobic008G045232--Sobic002G289701 Sobic008G045232--Sobic005G030200 Sobic008G045232--Sobic002G191300 Sobic008G045232--Sobic001G189800 Sobic008G045232--Sobic005G085800 Sobic008G045232--Sobic008G045100 Sobic008G045232--Sobic001G234700 Sobic005G030200--Sobic002G191300 Sobic003G083100 Sobic003G083100 Sobic005G030200--Sobic003G083100 Sobic005G030200--Sobic002G289701 Sobic001G406600 Sobic001G406600 Sobic005G030200--Sobic001G406600 Sobic005G120433 Sobic005G120433 Sobic005G030200--Sobic005G120433 Sobic005G030200--Sobic008G045100 Sobic005G030200--Sobic001G234700 Sobic002G191300--Sobic001G234700 Sobic001G033701--Sobic004G090900 Sobic002G046500 Sobic002G046500 Sobic001G033701--Sobic002G046500 Sobic001G033701--Sobic001G045300 Sobic002G289601 Sobic002G289601 Sobic001G033701--Sobic002G289601 Sobic005G014600 Sobic005G014600 Sobic001G033701--Sobic005G014600 Sobic002G084100 Sobic002G084100 Sobic001G033701--Sobic002G084100 Sobic001G033701--Sobic007G027400 Sobic001G033701--Sobic008G008701 Sobic009G113300 Sobic009G113300 Sobic001G033701--Sobic009G113300 Sobic003G210701--Sobic001G234700 Sobic006G137900 Sobic006G137900 Sobic004G325150--Sobic006G137900 Sobic005G013700 Sobic005G013700 Sobic004G325150--Sobic005G013700 Sobic004G325150--Sobic008G008701 Sobic003G407400 Sobic003G407400 Sobic004G325150--Sobic003G407400 Sobic004G325150--Sobic004G122700 Sobic004G325150--Sobic001G138500 Sobic004G325150--Sobic001G045300 Sobic004G325150--Sobic005G207550 Sobic004G325150--Sobic007G027400
Octagon: transcription factors


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