Gene annotation
Transcriptome id Sobic.005G139225.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIM1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
3 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.002G409500 lipase precursor, putative, expressed -
5 Sobic.K030700 - -
6 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
7 Sobic.007G094050 - -
8 Sobic.006G030700 receptor kinase, putative, expressed -
9 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
10 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
11 Sobic.003G138200 expressed protein -
12 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
13 Sobic.005G215200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@plant viral response family protein, putative, expressed -
14 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
15 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
16 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
17 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
18 Sobic.009G256800 expressed protein -
19 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
20 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -


Gene co-expression network
sample Sobic005G139225 Sobic005G139225 Sobic007G093000 Sobic007G093000 Sobic005G139225--Sobic007G093000 Sobic001G162700 Sobic001G162700 Sobic005G139225--Sobic001G162700 Sobic007G092900 Sobic007G092900 Sobic005G139225--Sobic007G092900 Sobic002G409500 Sobic002G409500 Sobic005G139225--Sobic002G409500 SobicK030700 SobicK030700 Sobic005G139225--SobicK030700 Sobic006G214200 Sobic006G214200 Sobic005G139225--Sobic006G214200 Sobic007G094050 Sobic007G094050 Sobic005G139225--Sobic007G094050 Sobic006G030700 Sobic006G030700 Sobic005G139225--Sobic006G030700 Sobic001G280200 Sobic001G280200 Sobic005G139225--Sobic001G280200 Sobic007G093000--Sobic007G092900 Sobic001G249300 Sobic001G249300 Sobic007G093000--Sobic001G249300 Sobic007G093000--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic007G093000--Sobic009G226300 Sobic007G187300 Sobic007G187300 Sobic007G093000--Sobic007G187300 Sobic009G054500 Sobic009G054500 Sobic007G093000--Sobic009G054500 Sobic003G259200 Sobic003G259200 Sobic007G093000--Sobic003G259200 Sobic001G150600 Sobic001G150600 Sobic007G093000--Sobic001G150600 Sobic004G320600 Sobic004G320600 Sobic007G093000--Sobic004G320600 Sobic001G162700--Sobic001G280200 Sobic001G162700--Sobic001G249300 Sobic010G098100 Sobic010G098100 Sobic001G162700--Sobic010G098100 Sobic009G029600 Sobic009G029600 Sobic001G162700--Sobic009G029600 Sobic001G162700--Sobic003G259200 Sobic004G255000 Sobic004G255000 Sobic001G162700--Sobic004G255000 Sobic001G483500 Sobic001G483500 Sobic001G162700--Sobic001G483500 Sobic001G162700--Sobic006G030700 Sobic001G412700 Sobic001G412700 Sobic001G162700--Sobic001G412700 Sobic007G092900--Sobic007G093000 Sobic007G092900--Sobic009G226300 Sobic007G092900--Sobic001G249300 Sobic007G092900--Sobic006G030700 Sobic007G092900--Sobic009G054500 Sobic007G092900--Sobic007G187300 Sobic007G092900--Sobic001G150600 Sobic007G092900--Sobic004G320600 Sobic006G100332 Sobic006G100332 Sobic007G092900--Sobic006G100332 Sobic002G409500--Sobic009G029600 Sobic003G219600 Sobic003G219600 Sobic002G409500--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic002G409500--Sobic009G211400 Sobic002G409500--Sobic001G280200 Sobic002G409500--Sobic001G249300 Sobic003G257100 Sobic003G257100 Sobic002G409500--Sobic003G257100 Sobic002G409500--Sobic004G255000 Sobic002G215800 Sobic002G215800 Sobic002G409500--Sobic002G215800 Sobic002G409500--Sobic003G259200 SobicK030700--Sobic010G098100 SobicK030700--Sobic001G280200 Sobic009G114000 Sobic009G114000 SobicK030700--Sobic009G114000 SobicK030700--Sobic001G162700 SobicK030700--Sobic006G030700 SobicK030700--Sobic007G187300 SobicK030700--Sobic001G249300 SobicK030700--Sobic006G214200 Sobic001G212000 Sobic001G212000 SobicK030700--Sobic001G212000 Sobic006G214200--Sobic003G257100 Sobic006G214200--Sobic009G029600 Sobic010G107000 Sobic010G107000 Sobic006G214200--Sobic010G107000 Sobic008G153400 Sobic008G153400 Sobic006G214200--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic006G214200--Sobic003G355600 Sobic006G214200--Sobic009G211400 Sobic006G199000 Sobic006G199000 Sobic006G214200--Sobic006G199000 Sobic006G204900 Sobic006G204900 Sobic006G214200--Sobic006G204900 Sobic003G138200 Sobic003G138200 Sobic006G214200--Sobic003G138200 Sobic006G225700 Sobic006G225700 Sobic007G094050--Sobic006G225700 Sobic007G201600 Sobic007G201600 Sobic007G094050--Sobic007G201600 Sobic006G241100 Sobic006G241100 Sobic007G094050--Sobic006G241100 Sobic006G222000 Sobic006G222000 Sobic007G094050--Sobic006G222000 Sobic004G227550 Sobic004G227550 Sobic007G094050--Sobic004G227550 Sobic007G022000 Sobic007G022000 Sobic007G094050--Sobic007G022000 Sobic005G081900 Sobic005G081900 Sobic007G094050--Sobic005G081900 Sobic010G060800 Sobic010G060800 Sobic007G094050--Sobic010G060800 Sobic006G030700--Sobic007G187300 Sobic006G030700--Sobic009G226300 Sobic006G030700--Sobic001G249300 Sobic006G030700--Sobic001G150600 Sobic006G030700--Sobic001G280200 Sobic006G030700--Sobic009G054500 Sobic006G030700--Sobic006G100332 Sobic006G030700--Sobic009G029600 Sobic003G087200 Sobic003G087200 Sobic006G030700--Sobic003G087200 Sobic001G280200--Sobic001G249300 Sobic001G280200--Sobic009G029600 Sobic001G280200--Sobic006G030700 Sobic001G280200--Sobic004G255000 Sobic001G280200--Sobic009G226300 Sobic001G280200--Sobic007G187300 Sobic001G280200--Sobic009G054500 Sobic001G280200--Sobic001G162700 Sobic001G280200--Sobic001G150600
Octagon: transcription factors


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