Gene annotation
Transcriptome id Sobic.005G153800.1
Synonym Sb05g021670
Functional annotation expressed protein
UniProt C5Y4E9
Pfam -
Panther DB PTHR36885 PTHR36885:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g35080.1 : expressed protein
MaizeGDB (Corn) Zm00025a034104 , Zm00025a015750
Brachypodium KQJ88206
Barley HORVU3Hr1G096570.2 , HORVU3Hr1G096570.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
2 Sobic.004G295500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.008G174500 expressed protein -
4 Sobic.004G293400 expressed protein -
5 Sobic.004G157100 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
6 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
7 Sobic.006G095300 expressed protein -
8 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
9 Sobic.008G066300 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
11 Sobic.007G167300 zinc-binding protein, putative, expressed -
12 Sobic.004G340566 - -
13 Sobic.010G109300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acylphosphatase, putative, expressed K01512: acylphosphatase
14 Sobic.006G131900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ethylene-responsive protein related, putative, expressed -
15 Sobic.002G037600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.008G000700 RNase P subunit p30, putative, expressed -
17 Sobic.004G203500 actin, putative, expressed K18584: ACTR3, actin-related protein 3
18 Sobic.006G183200 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
20 Sobic.007G028832 - -


Gene co-expression network
sample Sobic005G153800 Sobic005G153800 Sobic003G119900 Sobic003G119900 Sobic005G153800--Sobic003G119900 Sobic004G295500 Sobic004G295500 Sobic005G153800--Sobic004G295500 Sobic008G174500 Sobic008G174500 Sobic005G153800--Sobic008G174500 Sobic004G293400 Sobic004G293400 Sobic005G153800--Sobic004G293400 Sobic004G157100 Sobic004G157100 Sobic005G153800--Sobic004G157100 Sobic005G084900 Sobic005G084900 Sobic005G153800--Sobic005G084900 Sobic006G095300 Sobic006G095300 Sobic005G153800--Sobic006G095300 Sobic009G234500 Sobic009G234500 Sobic005G153800--Sobic009G234500 Sobic008G066300 Sobic008G066300 Sobic005G153800--Sobic008G066300 Sobic004G014100 Sobic004G014100 Sobic003G119900--Sobic004G014100 Sobic003G119900--Sobic008G174500 Sobic003G129300 Sobic003G129300 Sobic003G119900--Sobic003G129300 Sobic007G167800 Sobic007G167800 Sobic003G119900--Sobic007G167800 Sobic010G152000 Sobic010G152000 Sobic003G119900--Sobic010G152000 Sobic006G127200 Sobic006G127200 Sobic003G119900--Sobic006G127200 Sobic008G160600 Sobic008G160600 Sobic003G119900--Sobic008G160600 Sobic003G217500 Sobic003G217500 Sobic003G119900--Sobic003G217500 Sobic010G223500 Sobic010G223500 Sobic003G119900--Sobic010G223500 Sobic004G203500 Sobic004G203500 Sobic004G295500--Sobic004G203500 Sobic010G054000 Sobic010G054000 Sobic004G295500--Sobic010G054000 Sobic003G240100 Sobic003G240100 Sobic004G295500--Sobic003G240100 Sobic006G183200 Sobic006G183200 Sobic004G295500--Sobic006G183200 Sobic003G094600 Sobic003G094600 Sobic004G295500--Sobic003G094600 Sobic003G389100 Sobic003G389100 Sobic004G295500--Sobic003G389100 Sobic002G193600 Sobic002G193600 Sobic004G295500--Sobic002G193600 Sobic009G026800 Sobic009G026800 Sobic004G295500--Sobic009G026800 Sobic003G410700 Sobic003G410700 Sobic004G295500--Sobic003G410700 Sobic003G042200 Sobic003G042200 Sobic008G174500--Sobic003G042200 Sobic003G062101 Sobic003G062101 Sobic008G174500--Sobic003G062101 Sobic001G194100 Sobic001G194100 Sobic008G174500--Sobic001G194100 Sobic006G184200 Sobic006G184200 Sobic008G174500--Sobic006G184200 Sobic010G009600 Sobic010G009600 Sobic008G174500--Sobic010G009600 Sobic009G156200 Sobic009G156200 Sobic008G174500--Sobic009G156200 Sobic008G174500--Sobic004G014100 Sobic008G174500--Sobic010G223500 Sobic006G100266 Sobic006G100266 Sobic008G174500--Sobic006G100266 Sobic009G066200 Sobic009G066200 Sobic004G293400--Sobic009G066200 Sobic001G309200 Sobic001G309200 Sobic004G293400--Sobic001G309200 Sobic002G239400 Sobic002G239400 Sobic004G293400--Sobic002G239400 Sobic008G112100 Sobic008G112100 Sobic004G293400--Sobic008G112100 Sobic002G348400 Sobic002G348400 Sobic004G293400--Sobic002G348400 Sobic003G439700 Sobic003G439700 Sobic004G293400--Sobic003G439700 Sobic001G433600 Sobic001G433600 Sobic004G293400--Sobic001G433600 Sobic002G241100 Sobic002G241100 Sobic004G293400--Sobic002G241100 Sobic001G440000 Sobic001G440000 Sobic004G293400--Sobic001G440000 Sobic002G349000 Sobic002G349000 Sobic004G157100--Sobic002G349000 Sobic001G085200 Sobic001G085200 Sobic004G157100--Sobic001G085200 Sobic002G230400 Sobic002G230400 Sobic004G157100--Sobic002G230400 Sobic004G157100--Sobic008G174500 Sobic004G157100--Sobic004G014100 Sobic003G142200 Sobic003G142200 Sobic004G157100--Sobic003G142200 Sobic006G143300 Sobic006G143300 Sobic004G157100--Sobic006G143300 Sobic002G221100 Sobic002G221100 Sobic004G157100--Sobic002G221100 Sobic002G354800 Sobic002G354800 Sobic004G157100--Sobic002G354800 Sobic009G002000 Sobic009G002000 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic006G164000 Sobic006G164000 Sobic005G084900--Sobic006G164000 Sobic002G280900 Sobic002G280900 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic010G059700 Sobic010G059700 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic001G506300 Sobic001G506300 Sobic006G095300--Sobic001G506300 Sobic003G041400 Sobic003G041400 Sobic006G095300--Sobic003G041400 Sobic001G196800 Sobic001G196800 Sobic006G095300--Sobic001G196800 Sobic006G095300--Sobic006G127200 Sobic001G521100 Sobic001G521100 Sobic006G095300--Sobic001G521100 Sobic010G165800 Sobic010G165800 Sobic006G095300--Sobic010G165800 Sobic002G315400 Sobic002G315400 Sobic006G095300--Sobic002G315400 Sobic010G257500 Sobic010G257500 Sobic006G095300--Sobic010G257500 Sobic003G297200 Sobic003G297200 Sobic006G095300--Sobic003G297200 Sobic001G261529 Sobic001G261529 Sobic009G234500--Sobic001G261529 Sobic002G266600 Sobic002G266600 Sobic009G234500--Sobic002G266600 Sobic002G099866 Sobic002G099866 Sobic009G234500--Sobic002G099866 Sobic002G015800 Sobic002G015800 Sobic009G234500--Sobic002G015800 Sobic001G264600 Sobic001G264600 Sobic009G234500--Sobic001G264600 Sobic001G509100 Sobic001G509100 Sobic009G234500--Sobic001G509100 Sobic003G035001 Sobic003G035001 Sobic009G234500--Sobic003G035001 Sobic003G092600 Sobic003G092600 Sobic009G234500--Sobic003G092600 Sobic005G083280 Sobic005G083280 Sobic009G234500--Sobic005G083280 Sobic005G003400 Sobic005G003400 Sobic008G066300--Sobic005G003400 Sobic002G188400 Sobic002G188400 Sobic008G066300--Sobic002G188400 Sobic005G127900 Sobic005G127900 Sobic008G066300--Sobic005G127900 Sobic005G178300 Sobic005G178300 Sobic008G066300--Sobic005G178300 Sobic008G066300--Sobic003G042200 Sobic005G110547 Sobic005G110547 Sobic008G066300--Sobic005G110547 Sobic005G150600 Sobic005G150600 Sobic008G066300--Sobic005G150600 Sobic001G025700 Sobic001G025700 Sobic008G066300--Sobic001G025700 Sobic008G023600 Sobic008G023600 Sobic008G066300--Sobic008G023600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.