Gene annotation
Transcriptome id Sobic.006G019100.1
Synonym Sb06g001780
Functional annotation expressed protein
UniProt C5YCA4
Pfam PF04195
Panther DB PTHR31099
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32010 : myosin heavy chain-related
RAP-DB (Rice) LOC_Os06g06950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.001G518000 protein kinase, putative, expressed -
3 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.006G188800 H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
6 Sobic.002G360500 expressed protein -
7 Sobic.002G417000 expressed protein -
8 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
9 Sobic.003G307200 expressed protein -
10 Sobic.003G342900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
11 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
12 Sobic.010G135300 expressed protein -
13 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
14 Sobic.006G274866 - -
15 Sobic.002G425200 expressed protein -
16 Sobic.001G300000 - -
17 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.002G338700 armadillo/beta-catenin repeat family protein, putative, expressed -
19 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.010G211700 - -


Gene co-expression network
sample Sobic006G019100 Sobic006G019100 Sobic008G038200 Sobic008G038200 Sobic006G019100--Sobic008G038200 Sobic001G518000 Sobic001G518000 Sobic006G019100--Sobic001G518000 Sobic003G096300 Sobic003G096300 Sobic006G019100--Sobic003G096300 Sobic003G177000 Sobic003G177000 Sobic006G019100--Sobic003G177000 Sobic006G188800 Sobic006G188800 Sobic006G019100--Sobic006G188800 Sobic002G360500 Sobic002G360500 Sobic006G019100--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic006G019100--Sobic002G417000 Sobic010G211800 Sobic010G211800 Sobic006G019100--Sobic010G211800 Sobic003G307200 Sobic003G307200 Sobic006G019100--Sobic003G307200 Sobic007G065300 Sobic007G065300 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic001G298800 Sobic001G298800 Sobic008G038200--Sobic001G298800 Sobic008G038200--Sobic003G096300 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic007G128100 Sobic007G128100 Sobic008G038200--Sobic007G128100 Sobic001G518000--Sobic002G360500 Sobic001G518000--Sobic002G417000 Sobic001G518000--Sobic003G307200 Sobic010G014500 Sobic010G014500 Sobic001G518000--Sobic010G014500 Sobic007G165800 Sobic007G165800 Sobic001G518000--Sobic007G165800 Sobic001G518000--Sobic010G211800 Sobic001G493900 Sobic001G493900 Sobic001G518000--Sobic001G493900 Sobic001G518000--Sobic008G038200 Sobic004G003700 Sobic004G003700 Sobic001G518000--Sobic004G003700 Sobic003G096300--Sobic008G038200 Sobic003G096300--Sobic002G098500 Sobic001G482300 Sobic001G482300 Sobic003G096300--Sobic001G482300 Sobic002G216600 Sobic002G216600 Sobic003G096300--Sobic002G216600 Sobic003G096300--Sobic007G065300 Sobic005G204100 Sobic005G204100 Sobic003G096300--Sobic005G204100 Sobic001G047200 Sobic001G047200 Sobic003G096300--Sobic001G047200 Sobic001G384700 Sobic001G384700 Sobic003G096300--Sobic001G384700 Sobic001G434100 Sobic001G434100 Sobic003G096300--Sobic001G434100 Sobic002G425200 Sobic002G425200 Sobic003G177000--Sobic002G425200 Sobic003G177000--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic006G280100 Sobic006G280100 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic007G159200 Sobic007G159200 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic006G188800--Sobic003G307200 Sobic001G143600 Sobic001G143600 Sobic006G188800--Sobic001G143600 Sobic003G311500 Sobic003G311500 Sobic006G188800--Sobic003G311500 Sobic006G188800--Sobic002G360500 Sobic004G004600 Sobic004G004600 Sobic006G188800--Sobic004G004600 Sobic006G242500 Sobic006G242500 Sobic006G188800--Sobic006G242500 Sobic002G074000 Sobic002G074000 Sobic006G188800--Sobic002G074000 Sobic001G231200 Sobic001G231200 Sobic006G188800--Sobic001G231200 Sobic002G338700 Sobic002G338700 Sobic006G188800--Sobic002G338700 Sobic002G360500--Sobic002G417000 Sobic002G360500--Sobic001G518000 Sobic002G360500--Sobic003G307200 Sobic002G360500--Sobic001G493900 Sobic002G360500--Sobic004G003700 Sobic002G360500--Sobic010G211800 Sobic008G114900 Sobic008G114900 Sobic002G360500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic002G360500--Sobic001G155700 Sobic008G006800 Sobic008G006800 Sobic002G360500--Sobic008G006800 Sobic002G417000--Sobic002G360500 Sobic002G417000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic002G417000--Sobic004G267600 Sobic002G417000--Sobic003G307200 Sobic002G417000--Sobic008G114900 Sobic002G417000--Sobic010G211800 Sobic010G192500 Sobic010G192500 Sobic002G417000--Sobic010G192500 Sobic002G417000--Sobic002G074000 Sobic006G221800 Sobic006G221800 Sobic002G417000--Sobic006G221800 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic010G211800--Sobic002G360500 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic002G319300 Sobic002G319300 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic003G307200--Sobic002G417000 Sobic003G307200--Sobic001G155700 Sobic003G307200--Sobic006G221800 Sobic003G307200--Sobic002G074000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900
Octagon: transcription factors


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