Gene annotation
Transcriptome id Sobic.002G338700.3,Sobic.002G338700.2
Synonym Sb02g036330
Functional annotation armadillo/beta-catenin repeat family protein, putative, expressed
UniProt A0A1W0W6P2 , A0A1W0W6Q5
Pfam -
Panther DB PTHR23315 PTHR23315:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61350 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os07g37350.1 : armadillo/beta-catenin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014902 , Zm00025a048379
Brachypodium PNT74947 , PNT74948 , PNT74949
Barley -
Wheat TraesCS2A02G205400 , TraesCS2B02G232800 , TraesCS2D02G210500
Populus -


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cDNA sequences
Sobic.002G338700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
2 Sobic.010G119300 expressed protein -
3 Sobic.002G417000 expressed protein -
4 Sobic.002G360500 expressed protein -
5 Sobic.008G114900 rhoGAP domain containing protein, expressed -
6 Sobic.004G198100 expressed protein -
7 Sobic.003G102000 expressed protein -
8 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
9 Sobic.001G347201 - -
10 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.002G074000 expressed protein -
12 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
13 Sobic.001G398400 expressed protein -
14 Sobic.001G493900 beta-galactosidase, putative, expressed -
15 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
16 Sobic.001G331800 AGO7, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
17 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
18 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
19 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
20 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein


Gene co-expression network
sample Sobic002G338700 Sobic002G338700 Sobic008G125700 Sobic008G125700 Sobic002G338700--Sobic008G125700 Sobic010G119300 Sobic010G119300 Sobic002G338700--Sobic010G119300 Sobic002G417000 Sobic002G417000 Sobic002G338700--Sobic002G417000 Sobic002G360500 Sobic002G360500 Sobic002G338700--Sobic002G360500 Sobic008G114900 Sobic008G114900 Sobic002G338700--Sobic008G114900 Sobic004G198100 Sobic004G198100 Sobic002G338700--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic002G338700--Sobic003G102000 Sobic003G260700 Sobic003G260700 Sobic002G338700--Sobic003G260700 Sobic001G347201 Sobic001G347201 Sobic002G338700--Sobic001G347201 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G006800 Sobic008G006800 Sobic008G125700--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic008G125700--Sobic002G313000 Sobic004G339500 Sobic004G339500 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic001G398400 Sobic001G398400 Sobic010G119300--Sobic001G398400 Sobic002G417000--Sobic002G360500 Sobic001G493900 Sobic001G493900 Sobic002G417000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic002G417000--Sobic004G267600 Sobic003G307200 Sobic003G307200 Sobic002G417000--Sobic003G307200 Sobic002G417000--Sobic008G114900 Sobic010G211800 Sobic010G211800 Sobic002G417000--Sobic010G211800 Sobic010G192500 Sobic010G192500 Sobic002G417000--Sobic010G192500 Sobic002G074000 Sobic002G074000 Sobic002G417000--Sobic002G074000 Sobic006G221800 Sobic006G221800 Sobic002G417000--Sobic006G221800 Sobic002G360500--Sobic002G417000 Sobic001G518000 Sobic001G518000 Sobic002G360500--Sobic001G518000 Sobic002G360500--Sobic003G307200 Sobic002G360500--Sobic001G493900 Sobic004G003700 Sobic004G003700 Sobic002G360500--Sobic004G003700 Sobic002G360500--Sobic010G211800 Sobic002G360500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic002G360500--Sobic001G155700 Sobic002G360500--Sobic008G006800 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic002G319300 Sobic002G319300 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G257600 Sobic004G257600 Sobic004G198100--Sobic004G257600 Sobic001G170800 Sobic001G170800 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G271300 Sobic004G271300 Sobic004G198100--Sobic004G271300 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic003G102000--Sobic004G257600 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic003G102000--Sobic002G313000 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic001G393200 Sobic001G393200 Sobic001G347201--Sobic001G393200 Sobic009G047500 Sobic009G047500 Sobic001G347201--Sobic009G047500 Sobic010G168700 Sobic010G168700 Sobic001G347201--Sobic010G168700 Sobic001G347201--Sobic008G125700 Sobic001G347201--Sobic010G119300 Sobic001G143400 Sobic001G143400 Sobic001G347201--Sobic001G143400 Sobic003G084100 Sobic003G084100 Sobic001G347201--Sobic003G084100 Sobic001G347201--Sobic004G003700 Sobic005G168400 Sobic005G168400 Sobic001G347201--Sobic005G168400
Octagon: transcription factors


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