Gene annotation
Transcriptome id Sobic.001G331800.1
Synonym ZIP, Sb01g032060, AGO7
Functional annotation AGO7, putative, expressed
UniProt C5WVP1
Pfam PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT1G69440 : Argonaute family protein
RAP-DB (Rice) LOC_Os03g33650.1 : AGO7, putative, expressed
MaizeGDB (Corn) Zm00025a002964
Brachypodium KQK14412 , KQK14411 , KQK14413
Barley HORVU0Hr1G005350.1 , HORVU0Hr1G005350.2
Wheat TraesCS2D02G412100 , TraesCS2A02G414800 , TraesCS2B02G434000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.002G074000 expressed protein -
3 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
4 Sobic.005G168400 expressed protein -
5 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
6 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
7 Sobic.002G338700 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
9 Sobic.003G307200 expressed protein -
10 Sobic.004G198100 expressed protein -
11 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
12 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
13 Sobic.010G247000 expressed protein -
14 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
15 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
16 Sobic.008G138000 XH domain containing protein, expressed -
17 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
19 Sobic.002G360500 expressed protein -
20 Sobic.010G026100 expressed protein -


Gene co-expression network
sample Sobic001G331800 Sobic001G331800 Sobic001G379900 Sobic001G379900 Sobic001G331800--Sobic001G379900 Sobic002G074000 Sobic002G074000 Sobic001G331800--Sobic002G074000 Sobic006G221800 Sobic006G221800 Sobic001G331800--Sobic006G221800 Sobic005G168400 Sobic005G168400 Sobic001G331800--Sobic005G168400 Sobic001G477400 Sobic001G477400 Sobic001G331800--Sobic001G477400 Sobic001G496400 Sobic001G496400 Sobic001G331800--Sobic001G496400 Sobic002G338700 Sobic002G338700 Sobic001G331800--Sobic002G338700 Sobic001G143400 Sobic001G143400 Sobic001G331800--Sobic001G143400 Sobic003G307200 Sobic003G307200 Sobic001G331800--Sobic003G307200 Sobic004G003700 Sobic004G003700 Sobic001G379900--Sobic004G003700 Sobic010G077000 Sobic010G077000 Sobic001G379900--Sobic010G077000 Sobic010G276600 Sobic010G276600 Sobic001G379900--Sobic010G276600 Sobic001G379900--Sobic006G221800 Sobic001G493900 Sobic001G493900 Sobic001G379900--Sobic001G493900 Sobic006G163300 Sobic006G163300 Sobic001G379900--Sobic006G163300 Sobic001G379900--Sobic001G143400 Sobic003G010700 Sobic003G010700 Sobic001G379900--Sobic003G010700 Sobic001G379900--Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic004G267600 Sobic004G267600 Sobic002G074000--Sobic004G267600 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic010G129700 Sobic010G129700 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic006G221800--Sobic001G496400 Sobic001G101700 Sobic001G101700 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic006G221800--Sobic001G493900 Sobic010G168700 Sobic010G168700 Sobic005G168400--Sobic010G168700 Sobic005G168400--Sobic001G143400 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic009G047500 Sobic009G047500 Sobic005G168400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic005G168400--Sobic005G199700 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic005G005700 Sobic005G005700 Sobic001G477400--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic001G477400--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic001G477400--Sobic008G006800 Sobic006G124400 Sobic006G124400 Sobic001G477400--Sobic006G124400 Sobic004G198100 Sobic004G198100 Sobic001G477400--Sobic004G198100 Sobic010G119300 Sobic010G119300 Sobic001G477400--Sobic010G119300 Sobic004G273000 Sobic004G273000 Sobic001G477400--Sobic004G273000 Sobic004G271300 Sobic004G271300 Sobic001G477400--Sobic004G271300 Sobic003G260700 Sobic003G260700 Sobic001G477400--Sobic003G260700 Sobic001G496400--Sobic006G221800 Sobic007G209200 Sobic007G209200 Sobic001G496400--Sobic007G209200 Sobic001G496400--Sobic008G114900 Sobic006G219500 Sobic006G219500 Sobic001G496400--Sobic006G219500 Sobic001G496400--Sobic004G003700 Sobic008G125700 Sobic008G125700 Sobic001G496400--Sobic008G125700 Sobic001G496400--Sobic006G124400 Sobic001G496400--Sobic010G119300 Sobic001G496400--Sobic001G101700 Sobic002G338700--Sobic008G125700 Sobic002G338700--Sobic010G119300 Sobic002G338700--Sobic002G417000 Sobic002G360500 Sobic002G360500 Sobic002G338700--Sobic002G360500 Sobic002G338700--Sobic008G114900 Sobic002G338700--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic002G338700--Sobic003G102000 Sobic002G338700--Sobic003G260700 Sobic001G347201 Sobic001G347201 Sobic002G338700--Sobic001G347201 Sobic001G143400--Sobic004G003700 Sobic001G143400--Sobic010G168700 Sobic001G143400--Sobic005G168400 Sobic007G147200 Sobic007G147200 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic001G143400--Sobic009G047500 Sobic001G143400--Sobic005G199700 Sobic008G138000 Sobic008G138000 Sobic001G143400--Sobic008G138000 Sobic001G143400--Sobic007G209200 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic003G307200--Sobic002G417000 Sobic001G155700 Sobic001G155700 Sobic003G307200--Sobic001G155700 Sobic003G307200--Sobic006G221800 Sobic003G307200--Sobic002G074000 Sobic001G518000 Sobic001G518000 Sobic003G307200--Sobic001G518000 Sobic003G307200--Sobic001G379900
Octagon: transcription factors


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