Gene annotation
Transcriptome id Sobic.006G091200.1
Synonym Sb06g017630
Functional annotation dehydration-responsive element-binding protein, putative, expressed
UniProt C5Y954
Pfam -
Panther DB PTHR31985 PTHR31985:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44940 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g35240.1 : dehydration-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a020705 , Zm00025a056129
Brachypodium KQJ82836
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G316100 DEFL71 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.003G232800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.009G019550 - -
4 Sobic.003G369800 - -
5 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
6 Sobic.004G277501 - -
7 Sobic.003G092400 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
8 Sobic.003G175300 expressed protein -
9 Sobic.007G218400 - -
10 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
11 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
12 Sobic.004G086500 expressed protein -
13 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
14 Sobic.009G059932 - -
15 Sobic.007G035900 expressed protein -
16 Sobic.009G059866 - -
17 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
18 Sobic.004G056500 - -
19 Sobic.002G258500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
20 Sobic.010G144600 - -


Gene co-expression network
sample Sobic006G091200 Sobic006G091200 Sobic004G316100 Sobic004G316100 Sobic006G091200--Sobic004G316100 Sobic003G232800 Sobic003G232800 Sobic006G091200--Sobic003G232800 Sobic009G019550 Sobic009G019550 Sobic006G091200--Sobic009G019550 Sobic003G369800 Sobic003G369800 Sobic006G091200--Sobic003G369800 Sobic010G237400 Sobic010G237400 Sobic006G091200--Sobic010G237400 Sobic004G277501 Sobic004G277501 Sobic006G091200--Sobic004G277501 Sobic003G092400 Sobic003G092400 Sobic006G091200--Sobic003G092400 Sobic003G175300 Sobic003G175300 Sobic006G091200--Sobic003G175300 Sobic007G218400 Sobic007G218400 Sobic006G091200--Sobic007G218400 Sobic004G316100--Sobic003G232800 Sobic004G316100--Sobic003G369800 Sobic004G316100--Sobic003G175300 Sobic004G316100--Sobic010G237400 Sobic007G035900 Sobic007G035900 Sobic004G316100--Sobic007G035900 Sobic004G316100--Sobic004G277501 Sobic010G144600 Sobic010G144600 Sobic004G316100--Sobic010G144600 Sobic003G175700 Sobic003G175700 Sobic004G316100--Sobic003G175700 Sobic009G059800 Sobic009G059800 Sobic004G316100--Sobic009G059800 Sobic003G232800--Sobic004G316100 Sobic003G232800--Sobic003G175300 Sobic003G232800--Sobic003G369800 Sobic003G232800--Sobic007G035900 Sobic003G232800--Sobic010G237400 Sobic003G232800--Sobic003G175700 Sobic003G232800--Sobic010G144600 Sobic003G232800--Sobic004G277501 Sobic002G023500 Sobic002G023500 Sobic003G232800--Sobic002G023500 Sobic009G019550--Sobic010G237400 Sobic009G019550--Sobic003G369800 Sobic002G346700 Sobic002G346700 Sobic009G019550--Sobic002G346700 Sobic004G316000 Sobic004G316000 Sobic009G019550--Sobic004G316000 Sobic004G056500 Sobic004G056500 Sobic009G019550--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic009G019550--Sobic002G102800 Sobic009G019550--Sobic010G144600 Sobic009G019550--Sobic009G059800 Sobic002G258500 Sobic002G258500 Sobic009G019550--Sobic002G258500 Sobic003G369800--Sobic010G237400 Sobic003G369800--Sobic003G175300 Sobic003G369800--Sobic009G059800 Sobic003G369800--Sobic002G102800 Sobic009G059932 Sobic009G059932 Sobic003G369800--Sobic009G059932 Sobic003G369800--Sobic004G056500 Sobic003G369800--Sobic010G144600 Sobic009G059866 Sobic009G059866 Sobic003G369800--Sobic009G059866 Sobic003G369800--Sobic007G218400 Sobic010G237400--Sobic003G369800 Sobic010G237400--Sobic009G059800 Sobic010G237400--Sobic009G059932 Sobic010G237400--Sobic002G102800 Sobic010G237400--Sobic009G059866 Sobic010G237400--Sobic007G218400 Sobic010G237400--Sobic004G056500 Sobic010G237400--Sobic010G144600 Sobic010G237400--Sobic003G175300 Sobic004G277501--Sobic004G316100 Sobic004G277501--Sobic003G232800 Sobic010G154400 Sobic010G154400 Sobic004G277501--Sobic010G154400 Sobic004G277501--Sobic003G175300 Sobic001G461600 Sobic001G461600 Sobic004G277501--Sobic001G461600 Sobic004G277501--Sobic007G035900 Sobic004G277501--Sobic003G369800 Sobic004G254300 Sobic004G254300 Sobic004G277501--Sobic004G254300 Sobic004G277501--Sobic002G023500 Sobic007G121200 Sobic007G121200 Sobic003G092400--Sobic007G121200 Sobic001G456000 Sobic001G456000 Sobic003G092400--Sobic001G456000 Sobic003G092400--Sobic004G254300 Sobic002G344201 Sobic002G344201 Sobic003G092400--Sobic002G344201 Sobic003G092400--Sobic009G019550 Sobic002G268300 Sobic002G268300 Sobic003G092400--Sobic002G268300 Sobic003G243100 Sobic003G243100 Sobic003G092400--Sobic003G243100 Sobic003G092400--Sobic010G237400 Sobic001G106500 Sobic001G106500 Sobic003G092400--Sobic001G106500 Sobic003G175300--Sobic007G035900 Sobic003G175300--Sobic003G175700 Sobic003G175300--Sobic010G144600 Sobic003G175300--Sobic003G369800 Sobic006G239600 Sobic006G239600 Sobic003G175300--Sobic006G239600 Sobic003G175300--Sobic002G023500 Sobic007G014300 Sobic007G014300 Sobic003G175300--Sobic007G014300 Sobic001G123650 Sobic001G123650 Sobic003G175300--Sobic001G123650 Sobic007G218400--Sobic009G059932 Sobic007G218400--Sobic009G059866 Sobic007G218400--Sobic009G059800 Sobic007G218400--Sobic002G102800 Sobic007G218400--Sobic004G056500 Sobic007G218400--Sobic010G237400 Sobic007G218400--Sobic010G144600 Sobic007G218400--Sobic003G369800 Sobic007G218400--Sobic004G254300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.