Gene annotation
Transcriptome id Sobic.006G160500.1
Synonym Sb06g023740
Functional annotation aspartyl protease family protein, putative, expressed
UniProt C5YCY2
Pfam PF14543
Panther DB PTHR13683 PTHR13683:SF276
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT4G16563 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os04g45270.1 : aspartyl protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a010433 , Zm00025a040323
Brachypodium KQJ83790
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.009G064766 - -
4 Sobic.008G124100 - -
5 Sobic.003G400266 - -
6 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
7 Sobic.005G003200 sugar-responsive gene(PubMedID : 25496467)@asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
8 Sobic.004G099100 expressed protein -
9 Sobic.003G176100 expressed protein -
10 Sobic.006G194150 - -
11 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
12 Sobic.003G156766 - -
13 Sobic.002G213800 auxin-repressed protein, putative, expressed -
14 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.002G051300 flavin-containing monooxygenase family protein, putative, expressed -
16 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.006G249000 cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
18 Sobic.006G020600 3-ketoacyl-CoA synthase 6, putative, expressed -
19 Sobic.009G102800 MRH1, putative, expressed -
20 Sobic.004G077000 expressed protein -


Gene co-expression network
sample Sobic006G160500 Sobic006G160500 Sobic001G277000 Sobic001G277000 Sobic006G160500--Sobic001G277000 Sobic007G189800 Sobic007G189800 Sobic006G160500--Sobic007G189800 Sobic009G064766 Sobic009G064766 Sobic006G160500--Sobic009G064766 Sobic008G124100 Sobic008G124100 Sobic006G160500--Sobic008G124100 Sobic003G400266 Sobic003G400266 Sobic006G160500--Sobic003G400266 Sobic010G146200 Sobic010G146200 Sobic006G160500--Sobic010G146200 Sobic005G003200 Sobic005G003200 Sobic006G160500--Sobic005G003200 Sobic004G099100 Sobic004G099100 Sobic006G160500--Sobic004G099100 Sobic003G176100 Sobic003G176100 Sobic006G160500--Sobic003G176100 Sobic001G277000--Sobic008G124100 Sobic001G277000--Sobic007G189800 Sobic001G277000--Sobic009G064766 Sobic004G345900 Sobic004G345900 Sobic001G277000--Sobic004G345900 Sobic009G078500 Sobic009G078500 Sobic001G277000--Sobic009G078500 Sobic002G213800 Sobic002G213800 Sobic001G277000--Sobic002G213800 Sobic004G199600 Sobic004G199600 Sobic001G277000--Sobic004G199600 Sobic005G085200 Sobic005G085200 Sobic001G277000--Sobic005G085200 Sobic001G277000--Sobic010G146200 Sobic007G189800--Sobic001G277000 Sobic007G189800--Sobic010G146200 Sobic007G189800--Sobic008G124100 Sobic007G189800--Sobic009G064766 Sobic005G085600 Sobic005G085600 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic009G064766--Sobic001G277000 Sobic009G064766--Sobic008G124100 Sobic009G064766--Sobic009G078500 Sobic009G064766--Sobic007G189800 Sobic009G064766--Sobic010G146200 Sobic009G064766--Sobic003G176100 Sobic010G270300 Sobic010G270300 Sobic009G064766--Sobic010G270300 Sobic005G130100 Sobic005G130100 Sobic009G064766--Sobic005G130100 Sobic009G064766--Sobic004G199600 Sobic008G124100--Sobic001G277000 Sobic008G124100--Sobic009G064766 Sobic008G013900 Sobic008G013900 Sobic008G124100--Sobic008G013900 Sobic008G124100--Sobic007G189800 Sobic008G124100--Sobic003G176100 Sobic008G124100--Sobic010G146200 Sobic006G020600 Sobic006G020600 Sobic008G124100--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic008G124100--Sobic002G051400 Sobic001G164200 Sobic001G164200 Sobic008G124100--Sobic001G164200 Sobic003G400266--Sobic007G189800 Sobic005G083733 Sobic005G083733 Sobic003G400266--Sobic005G083733 Sobic003G400266--Sobic006G249000 Sobic003G148700 Sobic003G148700 Sobic003G400266--Sobic003G148700 Sobic003G400266--Sobic001G277000 Sobic003G400266--Sobic005G003200 Sobic003G400266--Sobic002G213800 Sobic003G400266--Sobic004G345900 Sobic003G400266--Sobic008G124100 Sobic010G146200--Sobic003G176100 Sobic009G113600 Sobic009G113600 Sobic010G146200--Sobic009G113600 Sobic010G050600 Sobic010G050600 Sobic010G146200--Sobic010G050600 Sobic010G146200--Sobic005G130100 Sobic007G059300 Sobic007G059300 Sobic010G146200--Sobic007G059300 Sobic010G146200--Sobic002G051400 SobicK024000 SobicK024000 Sobic010G146200--SobicK024000 Sobic010G146200--Sobic009G078500 Sobic010G146200--Sobic007G189800 Sobic005G003200--Sobic006G249000 Sobic001G363100 Sobic001G363100 Sobic005G003200--Sobic001G363100 Sobic005G003200--Sobic005G130100 Sobic009G231300 Sobic009G231300 Sobic005G003200--Sobic009G231300 Sobic005G003200--Sobic010G146200 Sobic005G003200--Sobic010G050600 Sobic005G003200--Sobic007G189800 Sobic005G003200--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic005G003200--Sobic007G156500 Sobic003G328800 Sobic003G328800 Sobic004G099100--Sobic003G328800 Sobic004G154600 Sobic004G154600 Sobic004G099100--Sobic004G154600 Sobic001G089100 Sobic001G089100 Sobic004G099100--Sobic001G089100 Sobic008G136000 Sobic008G136000 Sobic004G099100--Sobic008G136000 Sobic006G213100 Sobic006G213100 Sobic004G099100--Sobic006G213100 Sobic006G194150 Sobic006G194150 Sobic004G099100--Sobic006G194150 Sobic010G163900 Sobic010G163900 Sobic004G099100--Sobic010G163900 Sobic004G259101 Sobic004G259101 Sobic004G099100--Sobic004G259101 Sobic006G241300 Sobic006G241300 Sobic004G099100--Sobic006G241300 Sobic003G176100--Sobic010G146200 Sobic003G176100--Sobic009G113600 Sobic008G108900 Sobic008G108900 Sobic003G176100--Sobic008G108900 Sobic003G176100--Sobic007G059300 Sobic003G176100--Sobic002G051400 Sobic003G176100--Sobic010G050600 Sobic009G196700 Sobic009G196700 Sobic003G176100--Sobic009G196700 Sobic002G062300 Sobic002G062300 Sobic003G176100--Sobic002G062300 Sobic006G132200 Sobic006G132200 Sobic003G176100--Sobic006G132200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.