Gene annotation
Transcriptome id Sobic.006G179600.1
Synonym Sb06g025420
Functional annotation RWP-RK domain-containing protein, putative, expressed
UniProt C5YE03
Pfam PF02042
Panther DB PTHR32002 PTHR32002:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35590 : RWP-RK domain-containing protein
RAP-DB (Rice) LOC_Os04g47640.1 : RWP-RK domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010203
Brachypodium -
Barley HORVU2Hr1G095940.13 , HORVU2Hr1G095940.12 , HORVU2Hr1G095940.11 , HORVU2Hr1G095940.10 , HORVU2Hr1G095940.14 , HORVU2Hr1G095940.9 , HORVU2Hr1G095940.8 , HORVU2Hr1G095940.3 , HORVU2Hr1G095940.2 , HORVU2Hr1G095940.1 , HORVU2Hr1G095940.7 , HORVU2Hr1G095940.6 , HORVU2Hr1G095940.5 , HORVU2Hr1G095940.4
Wheat TraesCS2D02G401400 , TraesCS2D02G401400 , TraesCS2D02G401400 , TraesCS2B02G422400
Populus -


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cDNA sequences
Sobic.006G179600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
3 Sobic.010G207400 protein kinase domain containing protein, expressed -
4 Sobic.001G341001 - -
5 Sobic.010G227400 glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
6 Sobic.006G015750 - -
7 Sobic.003G091400 seven in absentia protein family domain containing protein, expressed -
8 Sobic.002G409250 - -
9 Sobic.002G078800 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.005G186300 - -
11 Sobic.007G205400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.001G200900 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G139700 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
14 Sobic.009G061900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.002G192600 no apical meristem protein, putative, expressed -
16 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.005G174000 - -
18 Sobic.002G293100 ZOS9-17 - C2H2 zinc finger protein, expressed -
19 Sobic.006G178400 monocopper oxidase, putative, expressed -
20 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic006G179600 Sobic006G179600 Sobic003G159500 Sobic003G159500 Sobic006G179600--Sobic003G159500 Sobic006G061100 Sobic006G061100 Sobic006G179600--Sobic006G061100 Sobic010G207400 Sobic010G207400 Sobic006G179600--Sobic010G207400 Sobic001G341001 Sobic001G341001 Sobic006G179600--Sobic001G341001 Sobic010G227400 Sobic010G227400 Sobic006G179600--Sobic010G227400 Sobic006G015750 Sobic006G015750 Sobic006G179600--Sobic006G015750 Sobic003G091400 Sobic003G091400 Sobic006G179600--Sobic003G091400 Sobic002G409250 Sobic002G409250 Sobic006G179600--Sobic002G409250 Sobic002G078800 Sobic002G078800 Sobic006G179600--Sobic002G078800 Sobic003G159500--Sobic006G179600 Sobic003G159500--Sobic006G061100 Sobic003G159500--Sobic010G207400 Sobic009G132600 Sobic009G132600 Sobic003G159500--Sobic009G132600 Sobic010G071600 Sobic010G071600 Sobic003G159500--Sobic010G071600 Sobic010G273800 Sobic010G273800 Sobic003G159500--Sobic010G273800 Sobic007G042300 Sobic007G042300 Sobic003G159500--Sobic007G042300 Sobic002G403200 Sobic002G403200 Sobic003G159500--Sobic002G403200 Sobic008G160500 Sobic008G160500 Sobic003G159500--Sobic008G160500 Sobic004G075700 Sobic004G075700 Sobic006G061100--Sobic004G075700 Sobic003G026900 Sobic003G026900 Sobic006G061100--Sobic003G026900 Sobic009G060300 Sobic009G060300 Sobic006G061100--Sobic009G060300 Sobic006G061100--Sobic010G207400 Sobic006G015500 Sobic006G015500 Sobic006G061100--Sobic006G015500 Sobic004G154300 Sobic004G154300 Sobic006G061100--Sobic004G154300 Sobic009G113100 Sobic009G113100 Sobic006G061100--Sobic009G113100 Sobic004G311400 Sobic004G311400 Sobic006G061100--Sobic004G311400 Sobic009G132650 Sobic009G132650 Sobic006G061100--Sobic009G132650 Sobic005G171800 Sobic005G171800 Sobic010G207400--Sobic005G171800 Sobic004G294100 Sobic004G294100 Sobic010G207400--Sobic004G294100 Sobic009G025100 Sobic009G025100 Sobic010G207400--Sobic009G025100 Sobic003G230500 Sobic003G230500 Sobic010G207400--Sobic003G230500 Sobic010G207400--Sobic010G227400 Sobic010G168500 Sobic010G168500 Sobic010G207400--Sobic010G168500 Sobic009G077250 Sobic009G077250 Sobic010G207400--Sobic009G077250 Sobic008G039700 Sobic008G039700 Sobic010G207400--Sobic008G039700 Sobic001G158600 Sobic001G158600 Sobic010G207400--Sobic001G158600 Sobic002G077600 Sobic002G077600 Sobic001G341001--Sobic002G077600 Sobic005G174900 Sobic005G174900 Sobic001G341001--Sobic005G174900 Sobic007G025300 Sobic007G025300 Sobic001G341001--Sobic007G025300 Sobic009G245750 Sobic009G245750 Sobic001G341001--Sobic009G245750 Sobic001G253501 Sobic001G253501 Sobic001G341001--Sobic001G253501 Sobic001G249233 Sobic001G249233 Sobic001G341001--Sobic001G249233 Sobic008G103066 Sobic008G103066 Sobic001G341001--Sobic008G103066 Sobic006G062700 Sobic006G062700 Sobic001G341001--Sobic006G062700 Sobic009G001600 Sobic009G001600 Sobic001G341001--Sobic009G001600 Sobic010G085700 Sobic010G085700 Sobic010G227400--Sobic010G085700 Sobic006G051750 Sobic006G051750 Sobic010G227400--Sobic006G051750 Sobic010G227400--Sobic008G039700 Sobic004G261000 Sobic004G261000 Sobic010G227400--Sobic004G261000 Sobic010G200400 Sobic010G200400 Sobic010G227400--Sobic010G200400 Sobic008G081000 Sobic008G081000 Sobic010G227400--Sobic008G081000 Sobic007G205100 Sobic007G205100 Sobic010G227400--Sobic007G205100 Sobic004G142000 Sobic004G142000 Sobic010G227400--Sobic004G142000 Sobic005G153200 Sobic005G153200 Sobic010G227400--Sobic005G153200 Sobic006G015750--Sobic003G091400 Sobic006G015750--Sobic002G409250 Sobic006G015750--Sobic002G078800 Sobic002G192600 Sobic002G192600 Sobic006G015750--Sobic002G192600 Sobic005G193700 Sobic005G193700 Sobic006G015750--Sobic005G193700 Sobic006G178400 Sobic006G178400 Sobic006G015750--Sobic006G178400 Sobic001G253400 Sobic001G253400 Sobic006G015750--Sobic001G253400 Sobic006G080500 Sobic006G080500 Sobic006G015750--Sobic006G080500 Sobic009G052400 Sobic009G052400 Sobic006G015750--Sobic009G052400 Sobic003G091400--Sobic006G015750 Sobic003G091400--Sobic002G409250 Sobic003G091400--Sobic002G078800 Sobic003G091400--Sobic005G193700 Sobic003G091400--Sobic006G178400 Sobic003G091400--Sobic002G192600 Sobic003G091400--Sobic001G253400 Sobic003G091400--Sobic006G080500 Sobic003G135000 Sobic003G135000 Sobic003G091400--Sobic003G135000 Sobic002G409250--Sobic003G091400 Sobic002G409250--Sobic006G015750 Sobic002G409250--Sobic002G078800 Sobic002G409250--Sobic005G193700 Sobic002G409250--Sobic001G253400 Sobic002G409250--Sobic006G178400 Sobic002G409250--Sobic002G192600 Sobic002G409250--Sobic006G080500 Sobic002G409250--Sobic003G135000 Sobic002G078800--Sobic006G015750 Sobic002G078800--Sobic003G091400 Sobic002G078800--Sobic002G409250 Sobic002G078800--Sobic002G192600 Sobic002G078800--Sobic006G080500 Sobic002G078800--Sobic006G178400 Sobic002G078800--Sobic009G052400 Sobic002G078800--Sobic003G135000 Sobic002G078800--Sobic005G193700
Octagon: transcription factors


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